Pairwise Alignments

Query, 311 a.a., riboflavin biosynthesis protein RibF (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 314 a.a., riboflavin biosynthesis protein RibF (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  215 bits (548), Expect = 1e-60
 Identities = 115/307 (37%), Positives = 175/307 (57%), Gaps = 3/307 (0%)

Query: 1   MELIRGIHNI-LSSHHGCVLTIGNFDGVHRGHAQVIANLVQKAKQLSLPPTVMTFEPQPQ 59
           ME+ R +  I L    G  +T+GNFDGVH GH ++I  ++ KA  L +P  V+TF P P 
Sbjct: 1   MEIARELQEISLDLSRGSCVTVGNFDGVHNGHRKLIGRVMAKAAALGVPSVVVTFCPHPL 60

Query: 60  ELFRGENAPARLSLLRDKIVLLDELGVERLVCVNFNRAFADQPAEHFIEELLVRKLGIKY 119
            +  G + P  ++    K+ L + LGV+  + + F R  A Q  E F+  +LV  L  + 
Sbjct: 61  RVLVGPHTPPLITDYEKKLDLFEALGVDLTLMLRFTREMAAQEPEEFVRRVLVDALHTRE 120

Query: 120 LVVGDDFCFGKGRKGDFDMLKQAGTRYGFTVVSTQSFIVGSQRVSSTAVREQLAKGNLEQ 179
           LV+G DF  GKGRKG+F++L++ G +YGF        I+    VSST +R+ +  G++  
Sbjct: 121 LVIGYDFSLGKGRKGNFELLQRLGKQYGFATEQLDPVIINDAVVSSTRIRDLIRAGDVWD 180

Query: 180 ARRLLGHPFTLSGRVAHG-QKIGRTIGFPTANIALKRNVVPVRGVFAVKLYWEDSDIYEG 238
            R L+   + + G+V  G  + G+ +GFPTAN+  +  ++P  GV+A  +   D  +Y+G
Sbjct: 181 VRPLMDRFYAIRGKVVRGMDRGGKLLGFPTANMEPRDELMPKPGVYATWVL-IDGQVYQG 239

Query: 239 VANIGFRPTVNGQICQLEVHLLDFEGDIYGKHVEVELVAKLRDEQPFDSLDALKQQILND 298
           V N+GF PT +     +E H+LDF+ DIYG  + V  V +LRDE+ F  LD L  QI  D
Sbjct: 240 VTNVGFNPTFDNARLSVETHILDFDRDIYGWEIRVSFVHRLRDERKFSGLDELVTQIRRD 299

Query: 299 ANEARAL 305
            + AR +
Sbjct: 300 VDLARQI 306