Pairwise Alignments

Query, 311 a.a., riboflavin biosynthesis protein RibF (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 317 a.a., riboflavin biosynthesis protein RibF (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  212 bits (540), Expect = 8e-60
 Identities = 123/306 (40%), Positives = 170/306 (55%), Gaps = 3/306 (0%)

Query: 1   MELIRGIHNILSSHHGCVLTIGNFDGVHRGHAQVIANLVQKAKQLSLPPTVMTFEPQPQE 60
           M ++R    +     G    IGNFDGVH GH  ++    + A+ L  P  VMTFEP P+E
Sbjct: 2   MRIVRDAEYVRPEDRGACAAIGNFDGVHLGHQSILTRTREIAQTLDAPVGVMTFEPHPRE 61

Query: 61  LFRGENAPARLSLLRDKIVLLDELGVERLVCVNFNRAFADQPAEHFIEELLVRKLGIKYL 120
            F  E  P RL     K   L++L V+ L  + F+ + A      F + +LV  LG++++
Sbjct: 62  YFAPEAPPFRLMSETAKAHRLEKLDVDILYQLPFDASLAGLTPRDFAQCILVDALGLRHV 121

Query: 121 VVGDDFCFGKGRKGDFDMLKQAGTRYGFTVVSTQSFIVGSQRVSSTAVREQLAKGNLEQA 180
           +VG DFCFGKGRKG  + L+  G   GF V         S  VSST++R  LA+G  E A
Sbjct: 122 IVGADFCFGKGRKGTAENLRSFGAEMGFGVTIADLLQDNSLVVSSTSIRTALAEGRPEDA 181

Query: 181 RRLLGHPFTLSGRVAHGQKIGRTIGFPTANIALKRNVVPVRGVFAVKLYWED---SDIYE 237
            R+LGH   + G V HG+K GRT+G+PTAN+++     P  GV+AV +   D   +  Y 
Sbjct: 182 ARMLGHWHRIDGPVEHGEKRGRTLGYPTANMSIAGLHPPKFGVYAVLVDVLDGPHAGHYH 241

Query: 238 GVANIGFRPTVNGQICQLEVHLLDFEGDIYGKHVEVELVAKLRDEQPFDSLDALKQQILN 297
           G A++G RP   G +  +E  L DF+GD+YG  + V LV+ LR E  FD LDAL  Q+  
Sbjct: 242 GAASMGVRPMFGGAVPNIETFLFDFKGDLYGAQLSVALVSFLRPEANFDGLDALIAQMDA 301

Query: 298 DANEAR 303
           D  +AR
Sbjct: 302 DCAKAR 307