Pairwise Alignments

Query, 940 a.a., isoleucyl-tRNA synthetase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 969 a.a., isoleucyl-tRNA synthetase from Sinorhizobium meliloti 1021

 Score =  671 bits (1730), Expect = 0.0
 Identities = 394/973 (40%), Positives = 552/973 (56%), Gaps = 74/973 (7%)

Query: 3   DYKFTLNLPETEFPMRGNLANREPEMLERWTKDGLYQQIRDSRIGRTPFILHDGPPYANG 62
           DY  TL LP+T+FPMR  L  +EPE + RW K  LY+++R S  GR  F+LHDGPPYANG
Sbjct: 9   DYSSTLYLPQTDFPMRAGLPQKEPETVARWQKMELYKKLRASAAGREKFVLHDGPPYANG 68

Query: 63  SIHIGHSVNKILKDIIVKSKTMSGFDAPYVPGWDCHGLPIELKVEQKV---GKPGQKISA 119
           +IHIGH++NKILKD+I +S  M GFDA YVPGWDCHGLPIE K+E+K    GK   ++  
Sbjct: 69  NIHIGHALNKILKDVINRSFQMRGFDANYVPGWDCHGLPIEWKIEEKYREKGKNKDEVPV 128

Query: 120 AEFREECRKYAAEQVDGQREDFIRLGVLGDWQNPYLTMDFATEANIVRSLSKVIENGHLH 179
            EFR+ECR++A+  +  Q E+F RLG+ GD++NPY TM+F  EA I   L K+  +G L+
Sbjct: 129 NEFRKECREFASGWIGIQTEEFKRLGIEGDFENPYTTMNFHAEARIAGELMKIARSGQLY 188

Query: 180 KGVKPVHWCTDCGSALAEAEVEYEDKTSPAIDVAFTAVDSKAVAVKFGVSDYSHSVS--- 236
           +G KPV W     +ALAEAEVEY D            V+S  + VKF V++   +++   
Sbjct: 189 RGSKPVMWSVVERTALAEAEVEYAD------------VESDMIWVKFPVTEGPEALAGAF 236

Query: 237 MVIWTTTPWTLPANRALSISPELDYSLVEFVKDGVTHA------VILADVLVEACMTRYG 290
           +VIWTTTPWT+P NRA++ S    Y L E       +       +I A  L +    +  
Sbjct: 237 VVIWTTTPWTIPGNRAIAYSSRYAYGLYEVATAENDYGPQPGEKLIFAKRLADESAAK-A 295

Query: 291 AESHSVLAKIKGAALELVRFKHPF------LAFDVPAILGDHVTTDAGTGVVHTAPGHGQ 344
             + + +  I+   L  +   HP        AF VP + G+HVT DAGTG VHTAP HG+
Sbjct: 296 KVTFNFVRDIEAGELAAITCAHPLHGLGGGYAFSVPLLDGEHVTDDAGTGFVHTAPSHGR 355

Query: 345 DDFVVG-------QKYGLE--VANPVGDNGVYK-------PDTEFFAGQHV------FKA 382
           +DF          ++ G+   +  PV D G +        PD E  AG+ +        A
Sbjct: 356 EDFEAWMDNVRLLEERGISSTIPFPVDDAGYFTADAPGFGPDAEGGAGRVIDDKGKKGDA 415

Query: 383 NDNVVALLKEKGALLHHVAYRHSYPHCWRHKTPIIFRATPQWFISMDNH-----NLRKQA 437
           N+ V+  L  + AL      +HSYPH WR K P+IFR TPQWF++MD        LR +A
Sbjct: 416 NERVIKALIGRHALFARGRLKHSYPHSWRSKKPVIFRNTPQWFVTMDKDFGDGTTLRSRA 475

Query: 438 LSEIEQIQWIPDWGQSRIEKMVENRPDWCISRQRTWGVPITLFVHRETEELHPDSVSLMA 497
           L+ I++ +++P  GQ+R+  M+E RPDW +SRQR WGVPI +F   E E L  D V+  A
Sbjct: 476 LNAIDETRFVPGAGQNRLRAMIEQRPDWVLSRQRAWGVPIAIFADDEGEILVDDEVN--A 533

Query: 498 RVANRIEQEGIQAWWDLDAAE-LLGEEAE--QYRKVTDTLDVWYDSGSTFASVVAARPEF 554
           R+    E+EG  AW+   A E  LG + +  ++ +VTD LDVW+DSGST    +  RP+ 
Sbjct: 534 RILVAFEKEGADAWFAEGAKERFLGNDHDHARWHQVTDILDVWFDSGSTHTFTLEDRPDL 593

Query: 555 HGHGVDLYLEGSDQHRGWFMSSLMISTAMTGKAPYKQVLTHGFTVDGKGRKMSKSIGNVI 614
                D+YLEGSDQHRGWF SSL+ S A  G+APY  V+THGFT+D KG KMSKS GN +
Sbjct: 594 K-WPADVYLEGSDQHRGWFHSSLLESCATRGRAPYNAVITHGFTMDEKGEKMSKSKGNTV 652

Query: 615 APQQVTNKLGADILRLWVAATDYSGEMTVSDEILNRSADAYRRIRNTARFLLANLNGFDP 674
            PQ+V    GADILRLWV  TDY  +  +   I+  + DAYR++RNT R++L  L     
Sbjct: 653 TPQEVMKDAGADILRLWVMTTDYWEDQRLGKTIIQTNIDAYRKLRNTIRWMLGTL--AHD 710

Query: 675 KNDLVAVEDMVALDRWAVRRAAALQQEIIEAYEQYNFHIVTQKLMQFCSIELGSFYLDII 734
           K ++VA+ DM  L+R  + R A L + + E Y+ ++F  + + L+ F ++EL +FY DI 
Sbjct: 711 KGEVVALSDMPELERLMLHRLAELDRLVREGYDAFDFKRIARALIDFSNVELSAFYFDIR 770

Query: 735 KDRQYTAKQEGHARRSCQSALFHIAEAMVRWIAPVLSFTADEVWQLLPGQRDAYVFTQEW 794
           KD  Y        RR+    +  + + +V W+AP+L FTA+E W  L     A     E 
Sbjct: 771 KDALYCDAPSSLRRRAALQVIRTLFDCLVTWLAPMLPFTAEEAW--LSRNPQAVSVHLEQ 828

Query: 795 YQGLQSITLDTDLSDAYWENLLTVRNEVNKVIEQARRDKRVGGSLEAEVTL-FADATLTE 853
           +  + +   +  L++  W  +  VR  V   +E  R++KR+G SLEA   +  AD  L +
Sbjct: 829 FPTVPAEWRNDALAEK-WRKIREVRKVVTGALEIERKEKRIGSSLEAAPAVHVADPDLLQ 887

Query: 854 QLTHIGDELRFVLLTSEAKVLPLVDATSDAVE-TELASLKLVVNATTAEKCERCWHHREE 912
            L   G +   + +TS  +V    D   DA    ++A + +V       KC R W    +
Sbjct: 888 ALN--GQDFAEICITSAIEV-DGGDGPEDAFRLPDVAKVSVVPKLAEGRKCARSWRITTD 944

Query: 913 VGTIEAHPTLCHR 925
           VG+   +P +  R
Sbjct: 945 VGSDPLYPDVSAR 957