Pairwise Alignments

Query, 940 a.a., isoleucyl-tRNA synthetase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 940 a.a., isoleucyl-tRNA synthetase (RefSeq) from Shewanella amazonensis SB2B

 Score = 1640 bits (4247), Expect = 0.0
 Identities = 788/940 (83%), Positives = 854/940 (90%)

Query: 1   MSDYKFTLNLPETEFPMRGNLANREPEMLERWTKDGLYQQIRDSRIGRTPFILHDGPPYA 60
           MSDYK TLNLPETEFPMRGNLANREP MLERW KD LYQQIRDSRIGR PFILHDGPPYA
Sbjct: 1   MSDYKSTLNLPETEFPMRGNLANREPAMLERWNKDKLYQQIRDSRIGRKPFILHDGPPYA 60

Query: 61  NGSIHIGHSVNKILKDIIVKSKTMSGFDAPYVPGWDCHGLPIELKVEQKVGKPGQKISAA 120
           NGSIHIGHSVNKILKDII+KSKT++GFDAPYVPGWDCHGLPIELKVEQKVGKPGQKISAA
Sbjct: 61  NGSIHIGHSVNKILKDIIIKSKTLAGFDAPYVPGWDCHGLPIELKVEQKVGKPGQKISAA 120

Query: 121 EFREECRKYAAEQVDGQREDFIRLGVLGDWQNPYLTMDFATEANIVRSLSKVIENGHLHK 180
           EFREECRKYAA QVDGQREDFIRLGVLGDW  PYLTMDFATEANIVRSL+KVI NGHL K
Sbjct: 121 EFREECRKYAAAQVDGQREDFIRLGVLGDWHKPYLTMDFATEANIVRSLAKVISNGHLQK 180

Query: 181 GVKPVHWCTDCGSALAEAEVEYEDKTSPAIDVAFTAVDSKAVAVKFGVSDYSHSVSMVIW 240
           GVKPVHWCTDCGSALAEAEVEYEDKTSPAIDV F  VD  A+  KFGV+ Y+H ++MVIW
Sbjct: 181 GVKPVHWCTDCGSALAEAEVEYEDKTSPAIDVGFNVVDKPALLAKFGVAQYNHDIAMVIW 240

Query: 241 TTTPWTLPANRALSISPELDYSLVEFVKDGVTHAVILADVLVEACMTRYGAESHSVLAKI 300
           TTTPWTLPANRAL+I+ +L+Y LV F K+ VT A+++ADVL E C+ R+GAES  VL +I
Sbjct: 241 TTTPWTLPANRALAIAADLEYVLVSFTKEDVTRAIVVADVLHEDCVKRFGAESFEVLGRI 300

Query: 301 KGAALELVRFKHPFLAFDVPAILGDHVTTDAGTGVVHTAPGHGQDDFVVGQKYGLEVANP 360
           KG+ LEL RF HPFL FDVP ILGDHVTTDAGTGVVHTAPGHGQDDFVVGQKYGLEVANP
Sbjct: 301 KGSELELTRFAHPFLDFDVPVILGDHVTTDAGTGVVHTAPGHGQDDFVVGQKYGLEVANP 360

Query: 361 VGDNGVYKPDTEFFAGQHVFKANDNVVALLKEKGALLHHVAYRHSYPHCWRHKTPIIFRA 420
           VGDNGVYK DT FFAGQHVFKANDNVVALLKEKGALL+HVAYRHSYPHCWRHKTPIIFRA
Sbjct: 361 VGDNGVYKADTPFFAGQHVFKANDNVVALLKEKGALLNHVAYRHSYPHCWRHKTPIIFRA 420

Query: 421 TPQWFISMDNHNLRKQALSEIEQIQWIPDWGQSRIEKMVENRPDWCISRQRTWGVPITLF 480
           TPQWFISMDN  LR  ALSEI+  QWIPDWGQSRIE MV NRPDWCISRQRTWGVPITLF
Sbjct: 421 TPQWFISMDNQGLRSTALSEIQNTQWIPDWGQSRIETMVANRPDWCISRQRTWGVPITLF 480

Query: 481 VHRETEELHPDSVSLMARVANRIEQEGIQAWWDLDAAELLGEEAEQYRKVTDTLDVWYDS 540
           V++E EELHP+SVSLM RVANRIEQ GIQAWWDLDAAELLG+EAEQYRKVTDTLDVWYDS
Sbjct: 481 VNKENEELHPNSVSLMERVANRIEQHGIQAWWDLDAAELLGDEAEQYRKVTDTLDVWYDS 540

Query: 541 GSTFASVVAARPEFHGHGVDLYLEGSDQHRGWFMSSLMISTAMTGKAPYKQVLTHGFTVD 600
           GSTF +VVAARPEF GHGVDLYLEGSDQHRGWFMSSLM+STAM  KAPYKQVLTHGFTVD
Sbjct: 541 GSTFETVVAARPEFQGHGVDLYLEGSDQHRGWFMSSLMLSTAMHAKAPYKQVLTHGFTVD 600

Query: 601 GKGRKMSKSIGNVIAPQQVTNKLGADILRLWVAATDYSGEMTVSDEILNRSADAYRRIRN 660
           GKGRKMSKSIGNVIAPQ+VTNKLGADILRLWVAATDYSGEM+VSDEILNR+AD+YRRIRN
Sbjct: 601 GKGRKMSKSIGNVIAPQEVTNKLGADILRLWVAATDYSGEMSVSDEILNRAADSYRRIRN 660

Query: 661 TARFLLANLNGFDPKNDLVAVEDMVALDRWAVRRAAALQQEIIEAYEQYNFHIVTQKLMQ 720
           T RFLLANLNGF+P+ D+VAV DMVALDRW VRRAA +Q EII AYEQYNFH+VT KLMQ
Sbjct: 661 TGRFLLANLNGFEPEADMVAVADMVALDRWMVRRAAKVQSEIIAAYEQYNFHLVTHKLMQ 720

Query: 721 FCSIELGSFYLDIIKDRQYTAKQEGHARRSCQSALFHIAEAMVRWIAPVLSFTADEVWQL 780
           FCS+ELGSFYLDIIKDRQYTAK+E HARRSCQSALFHIAEAMVRWIAPVLSFTADE+WQL
Sbjct: 721 FCSVELGSFYLDIIKDRQYTAKRESHARRSCQSALFHIAEAMVRWIAPVLSFTADEIWQL 780

Query: 781 LPGQRDAYVFTQEWYQGLQSITLDTDLSDAYWENLLTVRNEVNKVIEQARRDKRVGGSLE 840
           LPG+R+AYVFTQEWY+GL+SITL++DL+D++WE LL+VRNEVNK +EQARRDK +GGSLE
Sbjct: 781 LPGKREAYVFTQEWYEGLESITLESDLADSHWELLLSVRNEVNKELEQARRDKVLGGSLE 840

Query: 841 AEVTLFADATLTEQLTHIGDELRFVLLTSEAKVLPLVDATSDAVETELASLKLVVNATTA 900
           A VTL+AD  L  ++  +GDELRFVLLTS+AKVLP+  A   AV TELA LK++V  T A
Sbjct: 841 ATVTLYADTELAAKVAVLGDELRFVLLTSDAKVLPIDAAPESAVATELAGLKVLVAKTEA 900

Query: 901 EKCERCWHHREEVGTIEAHPTLCHRCVTNIEGDGEVRLFA 940
            KCERCWHHRE+VG++EAHP+LC RCVTNIEG+GE R FA
Sbjct: 901 AKCERCWHHREDVGSVEAHPSLCGRCVTNIEGEGEARAFA 940