Pairwise Alignments

Query, 940 a.a., isoleucyl-tRNA synthetase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 976 a.a., isoleucyl-tRNA synthetase IleS from Phaeobacter inhibens DSM 17395

 Score =  679 bits (1752), Expect = 0.0
 Identities = 394/995 (39%), Positives = 549/995 (55%), Gaps = 104/995 (10%)

Query: 3   DYKFTLNLPETEFPMRGNLANREPEMLERWTKDGLYQQIRDSRIG-------RTPFILHD 55
           +YK TLNLP+T+FPMR  L  REP  LERW + G+Y ++R+           R PF LHD
Sbjct: 10  EYKDTLNLPKTDFPMRAGLPKREPGWLERWAQIGVYDKLREKAAAAKGTDAERKPFTLHD 69

Query: 56  GPPYANGSIHIGHSVNKILKDIIVKSKTMSGFDAPYVPGWDCHGLPIELKVEQ---KVGK 112
           GPPYANG +HIGH++NK +KD+IV+S  M GFDA YVPGWDCHGLPIE K+E+   K GK
Sbjct: 70  GPPYANGHLHIGHALNKTIKDMIVRSHQMMGFDARYVPGWDCHGLPIEWKIEEQYRKKGK 129

Query: 113 PGQKISAAEFREECRKYAAEQVDGQREDFIRLGVLGDWQNPYLTMDFATEANIVRSLSKV 172
              ++   +FR+ECR +A E V  QRE+F RLG+ G+W +PYLTM++  EA I     K 
Sbjct: 130 NKDEVPVVDFRQECRAFADEWVGIQREEFKRLGITGNWDDPYLTMNYHAEAVIAGEFQKF 189

Query: 173 IENGHLHKGVKPVHWCTDCGSALAEAEVEYEDKTSPAIDVAFTAVDSKAVAVKFGVSDYS 232
           + NG L++G KPV W     +ALAEAE+EY D  S  I V F   ++     K  V    
Sbjct: 190 LMNGTLYQGSKPVMWSPVEKTALAEAEIEYHDHKSHTIWVPFGTANATGDLAKARV---- 245

Query: 233 HSVSMVIWTTTPWTLPANRALSISPELDYSLVEF---VKDGVT---HAVILADVLVEACM 286
                VIWTTTPWT+P+N+A++ +P++ Y L       ++  T      + AD L    +
Sbjct: 246 -----VIWTTTPWTIPSNKAVAYNPKVAYGLYRVDATQEESWTTPGELYLFADALAADAL 300

Query: 287 TRYGAESHSVLAKIKGAALELVRFKHPFLA---------FDVPAILGDHVTTDAGTGVVH 337
            +      + +  ++ +  + +   HPF           +DVP I GDHVT DAGTG VH
Sbjct: 301 EKSRVTEFTKVRDVEASEFDGLILNHPFKGIEGANGFWDYDVPMIDGDHVTDDAGTGFVH 360

Query: 338 TAPGHGQDDF--VVGQKYGLEVANPVGDNGVYKPDTEFFAGQHVF-------KANDNVVA 388
           TAP HG DD+   V + +   + + VG+   + P   FFAG  VF       KAN  V+A
Sbjct: 361 TAPSHGADDYECFVARNWIDRMTHNVGEESEFLPHVPFFAGLQVFDKKGKEGKANTAVIA 420

Query: 389 LLKEKGALLHHVAYRHSYPHCWRHKTPIIFRATPQWFISMDNH----------NLRKQAL 438
            L E G ++      HSYPH WR K PI+FR TPQWF S+D             +R +AL
Sbjct: 421 KLVEAGGIIARGRVTHSYPHSWRSKAPIVFRNTPQWFASVDRELDDGMGEMGDTIRTRAL 480

Query: 439 SEIEQ-IQWIPDWGQSRIEKMVENRPDWCISRQRTWGVPITLFVHRETEELHPDSV---- 493
           + I+Q +QW P  G++R+  M+E+RPDW +SRQR WGVP+T F  +      P+ +    
Sbjct: 481 NSIDQLVQWTPQTGRNRLYSMIESRPDWVLSRQRAWGVPLTCFTKKGLLPTDPEFLLRNE 540

Query: 494 SLMARVANRIEQEGIQAWWDLDAAELLGE---EAEQYRKVTDTLDVWYDSGSTFASVVAA 550
           +L  R+    E+ G   W+     E + +     E Y +V D LDVW+DSGST A V+  
Sbjct: 541 ALNTRIVAAFEEHGADVWYADGFKEKMLDGIANPEDYDQVFDVLDVWFDSGSTHAFVLRD 600

Query: 551 RPEFHGHGV-DLYLEGSDQHRGWFMSSLMISTAMTGKAPYKQVLTHGFTVDGKGRKMSKS 609
           R +    G+ D+Y+EG+DQHRGWF SSL+ +    G+APY+ V+THGFT+D KG KMSKS
Sbjct: 601 REDGTKDGIADVYMEGTDQHRGWFHSSLLQACGTKGRAPYRNVVTHGFTLDEKGNKMSKS 660

Query: 610 IGNVIAPQQVTNKLGADILRLWVAATDYSGEMTVSDEILNRSADAYRRIRNTARFLLANL 669
           +GN I P+++  + GADILRLWVA TDY+ +  +  EIL   AD YRR+RNT R++L NL
Sbjct: 661 LGNTIVPEKIVQQYGADILRLWVAQTDYTADQRIGAEILKGVADGYRRLRNTMRYMLGNL 720

Query: 670 NGFDPKNDLVAVEDMVALDRWAVRRAAALQQEIIEAYEQYNFHIVTQKLMQFCSIELGSF 729
             F  ++  V   DM  L++W + R A L  ++   Y+ Y+F  V   +  F +++L +F
Sbjct: 721 ADFS-EDQRVDPADMPELEQWVLHRLAELDHKVRTGYQAYDFQGVFSAVFNFATVDLSAF 779

Query: 730 YLDIIKDRQYTAKQEGHAR--RSCQSALFHIAEAMVRWIAPVLSFTADEVW-QLLPGQRD 786
           Y D+ KD  Y      +AR  R+    LFH    +  W+AP+L FT +EVW +  PG  D
Sbjct: 780 YFDVRKDALYCDGDTLNARAARTVLDILFH---RLTTWLAPILVFTMEEVWLERFPGD-D 835

Query: 787 AYVFTQEWYQGLQSITLDTDLSDAYWENLLTVRNEVNKVIEQARRDKRVGGSLEAEVTL- 845
           + +  Q+      +  L+  L+ A W  +   R  V   +E  R DK +G SLEA   + 
Sbjct: 836 SSLHLQD-IPATPADWLNEPLA-AKWAKVRQARRVVTAALEVQRVDKVIGASLEAAPVVH 893

Query: 846 --------------FADATLTEQLTHIGDELRFVLLTSEAKVLPLVDATSDAVETELASL 891
                         FAD  +T  +   GD        +EA  +P VD  S          
Sbjct: 894 VRDAEVLAALKSVNFADVCITSDIALSGDP-----APAEAFRMPEVDGVS---------- 938

Query: 892 KLVVNATTAEKCERCWHHREEVGTIEAHPTLCHRC 926
            +V      +KC+RCW    +VG   +H  +C RC
Sbjct: 939 -VVFEKADGDKCQRCWKILPDVGN-HSHAGVCGRC 971