Pairwise Alignments

Query, 940 a.a., isoleucyl-tRNA synthetase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 938 a.a., isoleucyl-tRNA synthetase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  825 bits (2131), Expect = 0.0
 Identities = 438/947 (46%), Positives = 597/947 (63%), Gaps = 24/947 (2%)

Query: 1   MSDYKFTLNLPETEFPMRGNLANREPEMLERWTKDGLYQQIRDSRIGRTPFILHDGPPYA 60
           MSDYK TL+LP+T+FPM+ NL  REPEML+ W     Y  +  +   +  ++LHDGPPYA
Sbjct: 1   MSDYKKTLHLPDTKFPMKANLTQREPEMLKFWEGIDAYAAMAQASGQKGQYVLHDGPPYA 60

Query: 61  NGSIHIGHSVNKILKDIIVKSKTMSGFDAPYVPGWDCHGLPIELKVEQKVGKPGQKISAA 120
           NG IH+G ++NKILKD++VKS+ M G+ A YVPGWDCHGLPIE KVEQ++G+  +++ A 
Sbjct: 61  NGHIHLGTALNKILKDMVVKSRNMQGYAARYVPGWDCHGLPIEHKVEQELGEKKKELPAH 120

Query: 121 EFREECRKYAAEQVDGQREDFIRLGVLGDWQNPYLTMDFATEANIVRSLSKVIENGHLHK 180
             R+ CR+YA + +D QR++F RLGVLG W  PY+TMD A E+   R L   +  G++ +
Sbjct: 121 VVRKRCRQYAEKYLDIQRKEFKRLGVLGAWDKPYMTMDPAYESATARELGNFVAAGNVVR 180

Query: 181 GVKPVHWCTDCGSALAEAEVEYEDKTSPAIDVAFTAVDSKAVAVKFGVSDYSHSVSMVIW 240
             KP++WC  C +ALAEAEVEY D TSP+I V F   D K   V   ++    S  +VIW
Sbjct: 181 SKKPIYWCCSCQTALAEAEVEYYDHTSPSIFVRFPLRDPKVADV---LNVDPASAWIVIW 237

Query: 241 TTTPWTLPANRALSISPELDYSLVEFVKDGVTHAVILADVLVEACMTRYGAESHSVLAKI 300
           TTTPWTLP N A+++ P+ DY++V    DG  +  +LA  LVE+    +G E+  V++ +
Sbjct: 238 TTTPWTLPDNMAVAVHPDHDYAVVR--HDGAHY--VLAAALVESSAKTFGWENCEVVSTV 293

Query: 301 KGAALELVRFKHPFLAFDVPAILGDHVTTDAGTGVVHTAPGHGQDDFVVGQKYGLEVANP 360
            GA LE +   HPF     P +L D+V  D+GTG VHTAPGHG++D+  G +YGLE+ +P
Sbjct: 294 PGAKLEGLVATHPFYDRPSPVVLADYVVLDSGTGCVHTAPGHGREDYETGLRYGLEILSP 353

Query: 361 VGDNGVYKPDTEFFAGQHVFKANDNVVALLKEKGALLHHVAYRHSYPHCWRHKTPIIFRA 420
           + D G +     FFAG  VF+AN  V+  L+E G LL      HSYPHCWR K P+IFRA
Sbjct: 354 LNDEGRFLDSVPFFAGLTVFEANPKVIEKLREVGNLLAERKISHSYPHCWRCKKPVIFRA 413

Query: 421 TPQWFISMDNHNLRKQALSEI-EQIQWIPDWGQSRIEKMVENRPDWCISRQRTWGVPITL 479
           T QWFI+M+ ++LR +ALS I   ++WIP WG+ RI  M+E RPDWCISRQRTWGVPI  
Sbjct: 414 TTQWFIAMEKNDLRARALSAIRNDVRWIPAWGEERIHNMIEFRPDWCISRQRTWGVPIIA 473

Query: 480 FVHRETEELHPDSVSLMARVANRIEQE--GIQAWWDLDAAELLGE-------EAEQYRKV 530
            +     E   D+ + M  +A+R  +   G   W++     ++             ++K 
Sbjct: 474 LLCEGCGEAWNDA-AWMRDIADRFAKHPTGCDYWYETPLEGIVPAGLACPHCGGNHWKKE 532

Query: 531 TDTLDVWYDSGSTFASVVAARPEFHGHGVDLYLEGSDQHRGWFMSSLMISTAMTGKAPYK 590
           TD LDVW+DSG++F++V+  R +      DLYLEGSDQHRGWF SSL+ S    G  PY+
Sbjct: 533 TDILDVWFDSGTSFSAVLEQRGD-TAFPADLYLEGSDQHRGWFHSSLLASMGTRGVPPYR 591

Query: 591 QVLTHGFTVDGKGRKMSKSIGNVIAPQQVTNKLGADILRLWVAATDYSGEMTVSDEILNR 650
            VLTHG+ VDG+GRKMSKSIGNVIAPQ++ +K GA+ILRLWVA+ DY  ++ +SDEIL+R
Sbjct: 592 AVLTHGYVVDGEGRKMSKSIGNVIAPQEIIDKYGAEILRLWVASVDYREDIRISDEILSR 651

Query: 651 SADAYRRIRNTARFLLANLNGFDPKNDLVAVEDMVALDRWAVRRAAALQQEIIEAYEQYN 710
             DAYRRIRNT R+LL N++   P+ ++V    M  LDR+A+         I EAY ++ 
Sbjct: 652 LVDAYRRIRNTCRYLLGNIDDLTPE-EIVPFSVMDPLDRYALDIVTDAHARIQEAYSEFE 710

Query: 711 FHIVTQKLMQFCSIELGSFYLDIIKDRQYTAKQEGHARRSCQSALFHIAEAMVRWIAPVL 770
           FH V   L   C  +L +FYLD++KDR Y + ++   RRS Q+AL HI   +VR +APVL
Sbjct: 711 FHKVFHTLHNLCVTDLSAFYLDVLKDRLYASAKDSPERRSAQTALLHILLVLVRDMAPVL 770

Query: 771 SFTADEVWQLLPGQRDAYVFTQEWYQGLQS--ITLDTDLSDAYWENLLTVRNEVNKVIEQ 828
           SFTA+EV++ +P        T    +G  +    + +D S+  WE +L VR+EV K IE 
Sbjct: 771 SFTAEEVFRHIPEALRPAAATVFALRGSDTPLYNVSSDESER-WEAVLAVRSEVTKAIEP 829

Query: 829 ARRDKRVGGSLEAEVTLFADATLTEQLTHIGDELRFVLLTSEAKVLPLVDATSDA-VETE 887
            R+   VG SL+  VTL+AD  L + L   G +LR V + S+  + PL DA  DA    E
Sbjct: 830 LRKAGTVGHSLDTHVTLYADHKLADLLRATGTDLRAVFIVSKLNIAPLEDAPQDAFASDE 889

Query: 888 LASLKLVVNATTAEKCERCWHHREEVGTIEAHPTLCHRCVTNIEGDG 934
           +  L++ V      KCERCW + EE+G    +P  C RC T +   G
Sbjct: 890 VKGLRIGVAKAPGAKCERCWIYHEELGADPGYPGACARCTTVLRTSG 936