Pairwise Alignments

Query, 940 a.a., isoleucyl-tRNA synthetase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 991 a.a., isoleucyl-tRNA synthetase (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  697 bits (1799), Expect = 0.0
 Identities = 405/991 (40%), Positives = 554/991 (55%), Gaps = 80/991 (8%)

Query: 2   SDYKFTLNLPETEFPMRGNLANREPEMLERWTKDGLYQQIRDSRIGRT--PFILHDGPPY 59
           + YK TLNLP+T+FPMR  L  REPE L RW + G+Y ++R+     T   F LHDGPPY
Sbjct: 9   NQYKDTLNLPKTDFPMRAGLPKREPEWLARWEEMGIYDRLREKAKAETRPAFTLHDGPPY 68

Query: 60  ANGSIHIGHSVNKILKDIIVKSKTMSGFDAPYVPGWDCHGLPIELKVEQKV---GKPGQK 116
           ANG++HIGH++NKILKD++V+S+ M G DA Y+PGWDCHGLPIE K+E+K    G+   +
Sbjct: 69  ANGNLHIGHALNKILKDMVVRSQQMMGRDARYIPGWDCHGLPIEWKIEEKYRAKGRDKDE 128

Query: 117 ISAAEFREECRKYAAEQVDGQREDFIRLGVLGDWQNPYLTMDFATEANIVRSLSKVIENG 176
           I   +FR+ECR +A   VD QRE+F RLGV G+W+ PYLTMDF  E  I     K +  G
Sbjct: 129 IPVIDFRQECRTFAEGWVDVQREEFKRLGVTGNWEKPYLTMDFHAERVIAEEFMKFLMTG 188

Query: 177 HLHKGVKPVHWCTDCGSALAEAEVEYEDKTSPAIDVAF---------TAVDSKAVAVKFG 227
            L++G KPV W     +ALAEAEVEY D+ + AI V F         + VD     +  G
Sbjct: 189 TLYQGSKPVMWSPVEKTALAEAEVEYHDRQTDAIWVKFPITKARVGESPVDEPDDHMGAG 248

Query: 228 ---VSDYSHSVSMVIWTTTPWTLPANRALSISPELDYSLVEFVKD------GVTHAVILA 278
              +++     +++IWTTTPWT+P NRA+     + Y L E           V    I+A
Sbjct: 249 AQLLAEQLEESAVIIWTTTPWTIPQNRAICFGEGISYGLYEITATPEECWASVGDTYIMA 308

Query: 279 DVLVEACMTRYGAESHSVLAKIKGAALELVRFKHPFLA---------FDVPAILGDHVTT 329
           D L EA +T+   E  +    +    L  V   HPF           FDVP + GDHVT 
Sbjct: 309 DALAEAALTQARVEGFTRRRDVTAGELSRVTCAHPFAGAEGAGGEWDFDVPLLAGDHVTD 368

Query: 330 DAGTGVVHTAPGHGQDDFVVGQKYGLEVANPVGDNGVYKPDTEFFAGQHVFK-------A 382
           DAGTG VHTAP HG DD+ +G K+GL +   V D+  Y+ D  FF G+ + K       A
Sbjct: 369 DAGTGFVHTAPSHGDDDYAIGVKHGLPMTYNVLDDSSYRADLPFFGGECILKPNGKPGGA 428

Query: 383 NDNVVALLKEKGALLHHVAYRHSYPHCWRHKTPIIFRATPQWFISMDN----------HN 432
           N  V+A L E   LL       S  H WR K P+I    PQWF ++D             
Sbjct: 429 NKAVIAKLVELDRLLARQRITISDAHSWRSKAPVIRLNRPQWFAAIDKPVGDGNDTYGET 488

Query: 433 LRKQALSEIEQ-IQWIPDWGQSRIEKMVENRPDWCISRQRTWGVPITLFVHRETEELHPD 491
           +R++AL+ I+Q + W P  G++R+  M+E RPDW +SRQR WGVP+T FV +  +   PD
Sbjct: 489 IRQRALTSIDQLVTWTPQTGRNRLYSMIEARPDWVLSRQRAWGVPLTCFVKKGAQPADPD 548

Query: 492 SV----SLMARVANRIEQEGIQAWWDLDA-AELLGEE--AEQYRKVTDTLDVWYDSGSTF 544
            +    ++ AR+    E EG  +W+   A A  LG E   E Y +V D LDVW+DSGST 
Sbjct: 549 YLLRDPAVNARIVEAFENEGADSWYAEGAKARFLGNEHDPEAYEQVFDILDVWFDSGSTH 608

Query: 545 ASVVAARPEFHGHGV-DLYLEGSDQHRGWFMSSLMISTAMTGKAPYKQVLTHGFTVDGKG 603
           A V+  R +    G+ DLYLEG+DQHRGWF SS++ +    G+APY+ VLTHGFT+D KG
Sbjct: 609 AFVLRDREDGSEDGLADLYLEGTDQHRGWFHSSMLQACGTMGRAPYRGVLTHGFTLDAKG 668

Query: 604 RKMSKSIGNVIAPQQVTNKLGADILRLWVAATDYSGEMTVSDEILNRSADAYRRIRNTAR 663
            KMSKS+GN +AP++V  + GADILRLWVA +DY+ ++ + DEIL   AD+YRR+RNT R
Sbjct: 669 NKMSKSVGNTVAPEKVVQQYGADILRLWVAQSDYTVDLRIGDEILKNVADSYRRLRNTMR 728

Query: 664 FLLANLNGFDPKNDLVAVEDMVALDRWAVRRAAALQQEIIEAYEQYNFHIVTQKLMQFCS 723
           +LL  L+ F+ + D VA E M  ++R  +   A L + +   Y  Y+F  V Q +  F +
Sbjct: 729 YLLGALSAFE-EADRVAPEQMPEMERVILHMMADLDERVRAGYAAYDFQGVFQSVFHFAT 787

Query: 724 IELGSFYLDIIKDRQYTAKQEGHARRSCQSALFHIAEAMVRWIAPVLSFTADEVW-QLLP 782
           + L + Y DI KD  Y  K +   RR+  + +  I   +  W+AP+L FT +EVW +  P
Sbjct: 788 VTLSAQYFDIRKDALYCDKPDSLRRRAALTVMDAIFHRLTAWLAPILVFTCEEVWLERFP 847

Query: 783 GQRDAYVFTQEWYQGLQSITLDTDLSDAY--WENLLTVRNEVNKVIEQARRDKRVGGSLE 840
           G  D+ +  Q++     +   D    +A   WE +  VR  V   +E  R+ K +G SLE
Sbjct: 848 GP-DSSIHLQDF----PAPRPDWRHPEAVGRWEVIRGVRRVVTGGLELERQAKTIGASLE 902

Query: 841 AEVTLFADATLTEQLTHIGDELRFVLLTSEAKVLPLVDATSDAVE-----TELASLKLVV 895
           A  T+   A       H+   +   L      V  L  +T    E      ++  + +V 
Sbjct: 903 AAPTVHVPA-------HVAGMIDPELFADTCIVSQLTVSTDPVPEGAFTLPDVPGVGMVF 955

Query: 896 NATTAEKCERCWHHREEVGTIEAHPTLCHRC 926
                EKC+RCW    +VGT  AHP  C RC
Sbjct: 956 ARAEGEKCQRCWKILPDVGT-HAHPGTCARC 985