Pairwise Alignments

Query, 164 a.a., type IV pilus biogenesis protein, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 163 a.a., prepilin-type N-terminal cleavage/methylation domain from Pseudomonas stutzeri RCH2

 Score = 78.2 bits (191), Expect = 6e-20
 Identities = 43/124 (34%), Positives = 72/124 (58%), Gaps = 8/124 (6%)

Query: 6   KGFTLVELMVTIAIAALLLSVGVPSFTAIYEATRSANEMQKINDLFAFARNQAVNYGATV 65
           +GFTL+EL+VT+A+ A+LL++  PSF +  ++ R+      +      AR++AV  GA V
Sbjct: 5   RGFTLIELIVTLAVLAILLAIAAPSFQSTIQSNRTQTITNDLTSALQLARSEAVKRGAKV 64

Query: 66  TVCPYAATPCGN--DWTKGFSVYIENNGAKKVLKVIDGFSSKDTISLTGPTDKTVNFTPD 123
            +C      C N  DW  G+ V ++      VL+V D    +DT+  TGP ++T+ + P+
Sbjct: 65  DICRRNGEVCANAADWGNGWLVQVKGGA---VLRVWDAVGGQDTV--TGP-NETLTYRPN 118

Query: 124 GLVS 127
           GL++
Sbjct: 119 GLLT 122