Pairwise Alignments

Query, 164 a.a., type IV pilus biogenesis protein, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 171 a.a., Type IV fimbrial biogenesis protein FimT from Xanthomonas campestris pv. campestris strain 8004

 Score = 62.8 bits (151), Expect = 3e-15
 Identities = 43/170 (25%), Positives = 80/170 (47%), Gaps = 14/170 (8%)

Query: 2   FTISKGFTLVELMVTIAIAALLLSVGVPSFTAIYEATRSANEMQKINDLFAFARNQAVNY 61
           F  ++GFTLVELM T+A+ A++ ++G PSF  +  + R+     ++  L   AR++A+  
Sbjct: 3   FCRARGFTLVELMTTVAVVAIVAAIGYPSFQGVIRSNRAVTANNEVVGLLNLARSEALRS 62

Query: 62  GATVTVCPYA-ATPCGNDWTKGFSVYIENN------GAKKVLKVIDGFSSKDTISLTGPT 114
           G +  +C  +  T C   W  G   + + N      G + VL+    +     + + GP+
Sbjct: 63  GQSGAICGSSNGTACDGSWGGGILAWSDVNTNGALDGGEPVLRY---WLGNPKLVVQGPS 119

Query: 115 DKTVNFTPDG--LVSTETSIIYCPS--GESDGSKSIKISTSGLIKEGSDN 160
              V F   G  + + +  I   P   G     +++ I+ +G ++   DN
Sbjct: 120 SGLVAFDGRGRRISAADQQITVRPDQCGGQQLMRTLLINAAGQVRSRKDN 169