Pairwise Alignments

Query, 164 a.a., type IV pilus biogenesis protein, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 163 a.a., methylation site containing protein (RefSeq) from Shewanella loihica PV-4

 Score =  151 bits (381), Expect = 6e-42
 Identities = 79/167 (47%), Positives = 114/167 (68%), Gaps = 8/167 (4%)

Query: 1   MFTISKGFTLVELMVTIAIAALLLSVGVPSFTAIYEATRSANEMQKINDLFAFARNQAVN 60
           M     GFTLVELMVTI +A ++L++G+PS  + YE+ R    +++I++L +FARNQA++
Sbjct: 1   MMKNKNGFTLVELMVTIVVAGIILTIGLPSLISAYESVRVNRSIERIHNLMSFARNQAIS 60

Query: 61  YGATVTVCPYA-ATPC--GNDWTKGFSVYI-ENNGAKKVLKVIDGFSSKDTISLTGPTDK 116
           YGATV VCP+A AT C  G +W  G  VY+ +  G  K L+ IDGF + D++  +GP   
Sbjct: 61  YGATVNVCPFASATSCGTGTNWKGGIRVYLTDAGGTDKELRAIDGFDTNDSVKGSGP--- 117

Query: 117 TVNFTPDGLVSTETSIIYCPSGESDGSKSIKISTSGLIKEGSDNQSC 163
            + F+ DGL S+  SIIYCP+G++  S+S+ IS+SGLI  G+D  SC
Sbjct: 118 LITFSADGL-SSSGSIIYCPNGKASESQSVTISSSGLISYGADGNSC 163