Pairwise Alignments

Query, 164 a.a., type IV pilus biogenesis protein, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 160 a.a., GspH/FimT family pseudopilin from Dyella japonica UNC79MFTsu3.2

 Score = 57.0 bits (136), Expect = 1e-13
 Identities = 43/162 (26%), Positives = 76/162 (46%), Gaps = 9/162 (5%)

Query: 5   SKGFTLVELMVTIAIAALLLSVGVPSFTAIYEATRSANEMQKINDLFAFARNQAVNYGAT 64
           S+GFTLVELMVTI++  +L ++ VP      +  R  N    +     FAR++A+   + 
Sbjct: 6   SQGFTLVELMVTISVLLVLATLAVPQMGPFLQRQRLKNATMDMASSVIFARSEAIKRNSN 65

Query: 65  VTVCPYAATPCGNDWTKGFSVYIENNGAKKVLKVIDGFSSKDTISLT-GPTDKTVNFTPD 123
           V V        G DW++G++V   +         I   S+ D + ++ G  + + NF  D
Sbjct: 66  VYV-----VASGTDWSRGWTV--SSAATVTAASTIRAQSALDGLQISEGGGNTSFNFGGD 118

Query: 124 GLVS-TETSIIYCPSGESDGSKSIKISTSGLIKEGSDNQSCS 164
           G +S T  S    P+  + G + + ++     +  +   +CS
Sbjct: 119 GRMSGTGMSFTLQPTVTAQGQQPLCVAVGATGRVQTTKGACS 160