Pairwise Alignments

Query, 164 a.a., type IV pilus biogenesis protein, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 200 a.a., GspH/FimT family pseudopilin from Ralstonia sp. UNC404CL21Col

 Score = 54.7 bits (130), Expect = 9e-13
 Identities = 43/142 (30%), Positives = 62/142 (43%), Gaps = 18/142 (12%)

Query: 5   SKGFTLVELMVTIAIAALLLSVGVPSFTAIYEATRSANEMQKINDLFAFARNQAVNYGAT 64
           S+GFTL+ELM TI +AA++L +  PS        R    +  I      AR+ A+   + 
Sbjct: 14  SRGFTLLELMATITVAAVILMLAGPSLNDFMRKQRVITAVDSITSAIGQARSIAIATNSY 73

Query: 65  VTVCPYAATPCGNDWTKGFSVYIEN---NG-----AKKVLKVIDGFSSKDTISLTGPTDK 116
           VT+ P      G  W  G  V+ E    NG     A K+L   D   +  T++       
Sbjct: 74  VTIAPVD----GTSWNSGVRVFSEGQSPNGTYSATADKLLGQYDAMPTGMTVAF----KS 125

Query: 117 TVNFTPDGLVSTETSIIYCPSG 138
           T N       S++TS+ Y P G
Sbjct: 126 TANIASS--TSSQTSLTYSPVG 145