Pairwise Alignments

Query, 164 a.a., type IV pilus biogenesis protein, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 157 a.a., GspH/FimT family pseudopilin from Ralstonia sp. UNC404CL21Col

 Score = 54.7 bits (130), Expect = 7e-13
 Identities = 33/120 (27%), Positives = 60/120 (50%), Gaps = 11/120 (9%)

Query: 5   SKGFTLVELMVTIAIAALLLSVGVPSFTAIYEATRSANEMQKINDLFAFARNQAVNYGAT 64
           ++GFTL ELMVT+A+ A+L+++ VPSF+ +     + N    ++   + AR +AV   A 
Sbjct: 8   TQGFTLTELMVTLAVLAVLVTIAVPSFSGMIATQATRNASFDLSSAVSLARAEAVKQNAV 67

Query: 65  VTVCPYAATPCGNDWTKGFSVYIENNGAKKVLKVIDGFSSKDTISLTGPTDKTVNFTPDG 124
            TV         ++W  G+++ +          VI  F     +++   +  T++F  DG
Sbjct: 68  ATV------STTSNWATGWTLTVGTPAT-----VIRTFGPYSGVTIAASSGNTLSFGNDG 116