Pairwise Alignments

Query, 429 a.a., NADH dehydrogenase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 436 a.a., FAD-dependent pyridine nucleotide-disulfide oxidoreductase from Marinobacter adhaerens HP15

 Score =  330 bits (846), Expect = 5e-95
 Identities = 174/430 (40%), Positives = 252/430 (58%), Gaps = 6/430 (1%)

Query: 6   IVIVGGGAAGLALASKLGRKLGGSDVVDVCLIDKSPIHIWKPKLHEVAVGVIDQSIEGLL 65
           IV+VGGGA GL L + LG KLG      + L+D    H+WKP LHEVA G +D S   + 
Sbjct: 7   IVVVGGGAGGLELVTSLGNKLGKKGKARITLVDSGLTHVWKPLLHEVASGSLDASANEIN 66

Query: 66  YRDHGLKNGYRYLRGEIEQCDPDTKTIRLAAVYSDSGELLLEPRQIEYDFLVLALGGVSN 125
           YR H  K+ Y +  G +   D D+K + +A  +   G  ++  R I YD LV+A+G  +N
Sbjct: 67  YRAHARKHHYEFQLGRMSGLDRDSKKVVIAPFHDVDGTEVVPERHIPYDTLVIAVGSTAN 126

Query: 126 SFNTLGAEQHCIFLDSLDNANLFHQKLLDALLQLNE-----TQEKVSIGIVGAGATGVEL 180
            F T GA+ +C+FLDSL  A  FH  +L+A L+ N       +  ++I I+GAGATGVEL
Sbjct: 127 DFGTPGAQDNCLFLDSLKQARRFHNLMLNAFLRKNHEALQGAEHTLNISIIGAGATGVEL 186

Query: 181 AAELHHVIESVKEYGYLNISKHHLDVHLIEASPKILPQLPERVSARAQAVLDKIGIRLHI 240
           AAEL      +  YG  ++    + + +IEA+ +ILP LP R+SA A   L+   +++  
Sbjct: 187 AAELRLASRELPVYGMNHLQPSDVSISVIEAADRILPALPGRLSAAATRELEHQRVKVLT 246

Query: 241 GVQVKEVTRDGFITQDGDMIKASLKVWAAGVKGPKAFQNFSKLPITPRNQVEVDACMRVK 300
           G  V EV     + +DG  + + + +WAAG+K P        L +   NQ+ V+  ++  
Sbjct: 247 GQPVSEVRPSTVVMKDGTELPSEMTIWAAGIKAPAFLAELEGLEVNRSNQLVVEQTLQTT 306

Query: 301 GQQDIYAIGDCALLIL-DSGQPVPPRAQAAAQMADTLYENIVNRLQGKVEKPFVYKDYGS 359
              +I+A GDCA     DS  PVPPRAQAA Q ADTL++ + NRL      PFVY D+GS
Sbjct: 307 QDANIFAFGDCAACPQPDSDLPVPPRAQAAHQQADTLFKTLCNRLDNGEAVPFVYNDHGS 366

Query: 360 LVSLSRFSAVGNLMGNLRSGTFFVEGHIARLMYISLYQRHLASLYGWFSAIIYRIAQKLL 419
           L++ SR++ VGNLMGNL   + ++EG +AR+ Y+SLY+ H  +L+G F   I  +  K+ 
Sbjct: 367 LINFSRYTTVGNLMGNLSGRSMYIEGKVARMFYLSLYRMHQVALHGMFRTGIIWLMDKIS 426

Query: 420 KWQRPKLKLH 429
           +  +P+LKLH
Sbjct: 427 RAMQPRLKLH 436