Pairwise Alignments

Query, 429 a.a., NADH dehydrogenase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 452 a.a., pyridine nucleotide-disulfide oxidoreductase from Cupriavidus basilensis FW507-4G11

 Score =  305 bits (782), Expect = 1e-87
 Identities = 170/439 (38%), Positives = 255/439 (58%), Gaps = 11/439 (2%)

Query: 2   ATKRIVIVGGGAAGLALASKLGRKLGGSDVVDVCLIDKSPIHIWKPKLHEVAVGVIDQSI 61
           A  RIVIVGGGA GL LA++LG  LG     +V LI+K+  H+WKPKLHE+A G +D S 
Sbjct: 14  APHRIVIVGGGAGGLELATRLGNTLGRRRQAEVTLIEKTRTHVWKPKLHEIAAGSMDMSA 73

Query: 62  EGLLYRDHGLKNGYRYLRGEIEQCDPDTKTIRLAAVYSDSGELLLEPRQIEYDFLVLALG 121
             + Y      + +RY  GE+   D + + + +A    D G  +  PR   YD L++A+G
Sbjct: 74  HEVGYLAQSHWHHFRYRVGEMVGLDRERQEVLVAPYVDDEGTQITPPRTFGYDTLIIAVG 133

Query: 122 GVSNSFNTLGAEQHCIFLDSLDNANLFHQKLLDALLQLNE-----TQEKVSIGIVGAGAT 176
             SN F T G  +H + L+S  +A  FH ++++A ++ +        +++ + I+GAGAT
Sbjct: 134 SQSNDFGTPGVYEHAMRLESAADALRFHSRMVNACIRAHAQTAPLLAQQLHVAIIGAGAT 193

Query: 177 GVELAAELHHVIESVKEYGYLNI-SKHHLDVHLIEASPKILPQLPERVSARAQAVLDKIG 235
           GVELAAELH     V  +G   + +   + V LIEA+P++LP LP R+S+  + +L K+G
Sbjct: 194 GVELAAELHRTTREVVAFGLDRVDADKDIRVTLIEAAPRVLPALPPRLSSATEGLLRKLG 253

Query: 236 IRLHIGVQVKEVTRDGFITQDGDMIKASLKVWAAGVKGPKAFQNFSKLPITPRNQVEVDA 295
           + +    +V EV   G +  DG ++ A L VWAAGVK P   ++ + L     NQ+ V+ 
Sbjct: 254 VEVLTDAKVAEVLPGGVLLGDGRLLPAELVVWAAGVKAPDFLKDLAGLETNRINQLVVNP 313

Query: 296 CMRVKGQQDIYAIGDCALLI-----LDSGQPVPPRAQAAAQMADTLYENIVNRLQGKVEK 350
            ++    ++I+AIGDCA           G  VPPRAQAA Q A  +   +  R+ GK   
Sbjct: 314 TLQASRDENIFAIGDCAACAWPEANQGKGGFVPPRAQAAHQQASHMVRQVRARMAGKPLA 373

Query: 351 PFVYKDYGSLVSLSRFSAVGNLMGNLRSGTFFVEGHIARLMYISLYQRHLASLYGWFSAI 410
            + Y+D+GSLVSL  FS VGN+MG L  G+  VEG  AR+MY+SLY+ H  +L+G+    
Sbjct: 374 DYRYRDFGSLVSLGEFSTVGNMMGGLIGGSLMVEGLFARMMYLSLYKMHELALHGFAKVA 433

Query: 411 IYRIAQKLLKWQRPKLKLH 429
           +  +A+ +++   P +KLH
Sbjct: 434 LDTLARSIVRRTEPHVKLH 452