Pairwise Alignments

Query, 429 a.a., NADH dehydrogenase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 463 a.a., putative NADH dehydrogenase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  154 bits (388), Expect = 7e-42
 Identities = 125/427 (29%), Positives = 206/427 (48%), Gaps = 41/427 (9%)

Query: 4   KRIVIVGGGAAGLALASKLGRKLGGSDVVDVCLIDKSPIHIWKPKLHEVA-VGVIDQSIE 62
           KR+VIVGGG  GL LA+KL  K  G  VV   LIDK+  H + P +++VA  G+   SI 
Sbjct: 11  KRVVIVGGGFGGLKLANKL--KKSGFQVV---LIDKNNYHQFPPLIYQVASAGMEPTSIS 65

Query: 63  GLLYRDHGLKNGYRYLRGEIEQCDPDTKTIRLAAVYSDSGELLLEPRQIEYDFLVLALGG 122
               +    +  + +   E+    P+   I+ +              + EYD+LVLA G 
Sbjct: 66  FPFRKIFQHRKDFYFRMAEVRAVFPEKNMIQTSI------------GKAEYDYLVLAAGT 113

Query: 123 VSNSFNTLGAEQHCIFLDSLDNANLFHQKLLDALLQL------NETQEKVSIGIVGAGAT 176
            +N F     E+  + + ++  A      LL  L +        E QE ++I +VG GAT
Sbjct: 114 TTNFFGNKHIEEEAMPMKNVSEAMGLRNALLANLERAVTCSNKQEQQELLNIVVVGGGAT 173

Query: 177 GVELAAELHHVIESVKEYGYLNISKHHLDVHLIEASPKILPQLPERVSARAQAVLDKIGI 236
           GVE+A  L  + + V    Y ++    + ++LIEA  ++L  + E  S+ A+  L ++G+
Sbjct: 174 GVEVAGVLSEMKKFVLPNDYPDMPSSLMHIYLIEAGSRLLAGMSEDSSSHAEQFLREMGV 233

Query: 237 RLHIGVQVKEVTRDGFITQDGDMIKASLKVWAAGVKGPKAFQNFSKLPITPRNQVEVDAC 296
            + +  +V +        +DG  I     +W +GV G  +F N +   I    +++VDA 
Sbjct: 234 NILLNKRVTDYRDHKVTLEDGSEIATRTFIWVSGVTG-VSFGNMNTSVIGRGGRIKVDAF 292

Query: 297 MRVKGQQDIYAIGDCALLILDSGQP--VPPRAQAAAQMADTLYENIVNRLQGKVEKPFVY 354
            RV+G  +++AIGD  +L  D   P   P  AQ A Q  + L +N++   +GK  KPF Y
Sbjct: 293 NRVEGTNNVFAIGDLCILSGDEDYPNGHPQLAQVAIQQGELLAKNLIRLEKGKEMKPFHY 352

Query: 355 KDYGSLVSLSRFSAVGNLMGNLRSGTFFVEGHIARLMYISLYQRHLASLYGWFSAIIYRI 414
           ++ GS+ ++ R  AV             ++G  A +M++ +   HL S+ G  + ++   
Sbjct: 353 RNLGSMATVGRNRAVAEF------SKVKMQGWFAWVMWLVV---HLRSILGVRNKVVV-- 401

Query: 415 AQKLLKW 421
              LL W
Sbjct: 402 ---LLNW 405