Pairwise Alignments

Query, 229 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 230 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  210 bits (534), Expect = 2e-59
 Identities = 102/228 (44%), Positives = 153/228 (67%), Gaps = 1/228 (0%)

Query: 1   MKTQFVPLNDANHKNLAIGDQVDYSLFETMHMLPLQVQEFMSAATSFPIVFTKNAQTGEF 60
           M  Q+VPLN+  HKNL +   ++ + FE  HMLPL VQEFM AATSFPI+F KN  +GE+
Sbjct: 1   MTAQYVPLNNTAHKNLKVKQALELAEFEKHHMLPLVVQEFMPAATSFPIIFAKNTDSGEY 60

Query: 61  LSIAITALKPNTNMLLKNGQWQSRYLPIQVQLYPFGMSYVD-NDKVILGIDINNSSVAEH 119
             +A+T+LKP +N  +K+G+W  RY+P+Q+++ PF     +  +K+++GI+ +++ ++E 
Sbjct: 61  QPVAVTSLKPESNKFIKDGKWTQRYVPMQLRVAPFIAGPDETQEKLLIGINQSSTLLSEE 120

Query: 120 EAHRLFDDSGKQTTYLSKKLELASLQASYHDMTKYFIKVLLNHGLLQTRTLTVTALDATK 179
           E   LF+++G+QT +L  +++       + ++TK F+K L +H LLQ +TLTV   D  K
Sbjct: 121 EGIALFNENGEQTEFLQDRVKFIGQLFDFRELTKQFVKTLTDHDLLQPKTLTVNGKDGEK 180

Query: 180 TNIDGIYTIDEGKLQQLDDTTLLDFAKRGFYSAIYAHLCSLSLIDLVM 227
            N DGIY +DE KL +L D   L+   +G  SAIYAHL SL+ IDLVM
Sbjct: 181 ANYDGIYMVDEKKLHELSDEAKLELFNKGALSAIYAHLASLNQIDLVM 228