Pairwise Alignments

Query, 324 a.a., methyl-accepting chemotaxis protein, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 647 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score = 63.2 bits (152), Expect = 2e-14
 Identities = 38/123 (30%), Positives = 69/123 (56%), Gaps = 4/123 (3%)

Query: 206 RTQQATGEIQKV----QSRVAETDSVMQASQTLSNQGVNRSEEIKLVLSKVTDLVSNISN 261
           RTQ++T EI+++    Q+   +  + + +S+TL++  V  S      L ++T  V+ I +
Sbjct: 524 RTQKSTEEIEELIAALQTGTQQVATTLDSSRTLTDNTVELSRRAGGALEQITRTVATIQH 583

Query: 262 MNIEVSHAAQEQTCVTEAISRTLNDLANVSGSASLDSEHLAQSSERLFHQGERLRALVTS 321
           MN +++ A++EQ+ V E I+R +  + ++S   +  SE  A SS  L   G  L+ LV  
Sbjct: 584 MNEQIATASEEQSVVAEQINRNVISVRDISEQTAAASEQTAASSVELARLGTHLQTLVGK 643

Query: 322 FRL 324
           FR+
Sbjct: 644 FRV 646