Pairwise Alignments

Query, 324 a.a., methyl-accepting chemotaxis protein, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 287 a.a., type IV pilus assembly protein PilM (RefSeq) from Shewanella amazonensis SB2B

 Score =  123 bits (309), Expect = 5e-33
 Identities = 61/120 (50%), Positives = 83/120 (69%), Gaps = 11/120 (9%)

Query: 44  FAATYAINVPSTAVNANILSASRASPTKIVTTIQQTWLFNLLKEALRRFGKVYEVEQMST 103
           F+A++A  +P  A +A++           +TTI  +W F LL EAL+R G  Y++ Q+S+
Sbjct: 12  FSASFAGALPCQAADASL-----------ITTIPNSWQFTLLTEALKRSGTNYQISQLSS 60

Query: 104 QMKPKRNAEEALAGTVDVFWSMTSKVLEETMFPVRIPLFKGLLGNRLLIIRKTDEAKFAK 163
           +M  KR  EEAL G +DVFWSMTS  LE T+ P+R+PLFKGLLGNRLLIIR+ D+ +FAK
Sbjct: 61  EMNQKRKVEEALEGNIDVFWSMTSAELERTVLPIRVPLFKGLLGNRLLIIREADQGRFAK 120