Pairwise Alignments

Query, 896 a.a., beta-hexosaminidase b precursor (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 884 a.a., Beta-N-acetylhexosaminidase (RefSeq) from Shewanella amazonensis SB2B

 Score = 1120 bits (2896), Expect = 0.0
 Identities = 569/899 (63%), Positives = 676/899 (75%), Gaps = 20/899 (2%)

Query: 1   MSKTIAATAILFALGLSACSQGPKTVNTPAPSSAEQPTPALLTQAQLQQFGDNLGVTYRV 60
           M  ++AA+AI  ALG+S CSQ P     PA  +AE   P++LTQA LQ F D L V YRV
Sbjct: 1   MKFSLAASAIFLALGVSGCSQAPVE---PAAVAAE---PSVLTQASLQAFADGLDVKYRV 54

Query: 61  LTNRPDDNCDKAAAEGRCFVAEIDFVPEVDLIGKEWAIYFSQMRPVQSVEGKEFSITHIK 120
           +TNRPD+ C K A EGRCF AEI     +D  G+++ IY+SQMRPVQSV+  +F I H+K
Sbjct: 55  VTNRPDEQCKKDAGEGRCFQAEIVLTSPIDFDGRDFEIYYSQMRPVQSVQSTDFVIEHVK 114

Query: 121 GDLYRIAPTEAFSGFSKGVKKTLRFRGELWQLSETDAMPNYYIVAGDLSPVVIASTQVKQ 180
           GDL+RI PT  F GF     +TL FRGELWQLSETDAMPNYYI A  L PVVIAST++  
Sbjct: 115 GDLHRIKPTGNFGGFKANQSQTLAFRGELWQLSETDAMPNYYITAPGLKPVVIASTRLAV 174

Query: 181 DPETRMEVRPYVEPFTDMVKQYSRTDADKLAPATASQLFSNNQNVSEDASLAVNTIIPTP 240
           + ET +E+RPYVE FTD  KQY RTD DKL  ATA  LF  NQ++  D + A   I+P P
Sbjct: 175 EAETGLELRPYVEAFTDADKQYRRTDNDKLPWATAPVLFEANQSLVVDPAAAAQRIVPAP 234

Query: 241 KTVVLHSNDKVVSLSSGIKLDVASVSSPSAEKQSFKTDQVAAALERLARLGVKESEQGLV 300
            +    +    + LS GI +++          Q      + AAL RLARLG++E   G  
Sbjct: 235 VSQTFEAGLGTLDLSGGIAVELP---------QGLDKAAIDAALARLARLGIEEDSSGAR 285

Query: 301 MKLSWRQ--GAEGSYLLDIKPDGIKIAAGDAAGFSYALSSLTSLIDVQDLRVNAMTIEDS 358
           +KL      GAE +Y L I+P+G +I A   AGF+Y LSSL +L+      ++A TI D+
Sbjct: 286 IKLVSDDSLGAE-AYQLVIRPEGAEIKAATDAGFAYGLSSLAALVQPGKPAISAQTITDA 344

Query: 359 PRYPFRGMHIDVARNFHSKAMIFALIDQMAAYKLNKLHLHMADDEGWRLEIDGLPELTDI 418
           PRY FRGMH+DV+RNFHSKA + +L+DQMAAYKLNKLHLHM DDEGWRLEIDGLPELT+I
Sbjct: 345 PRYGFRGMHVDVSRNFHSKAFMLSLLDQMAAYKLNKLHLHMGDDEGWRLEIDGLPELTEI 404

Query: 419 GSKRCHDLEENTCLLPQLGSGPFAESSVNGFYSKQDYIDILKYANARQIQVIPSMDMPGH 478
           GSKRCHDL E+TCLLPQLGSGP A+  VNGFYSK DYI+ILKYA+ARQIQVIPSMDMPGH
Sbjct: 405 GSKRCHDLAEDTCLLPQLGSGPDADVKVNGFYSKADYIEILKYASARQIQVIPSMDMPGH 464

Query: 479 SRAAIKSMEARYRKLLAQGKPTEAKTYLLSDAADTTVYSSVQYYNDNTLNVCMESTYQFV 538
           SRAA+K+ME RYR+L   G    A+ Y L D  D TVYSS+QYY+DNTLNVC+ESTY FV
Sbjct: 465 SRAAVKAMEVRYRRLAEVGDIKGAEEYRLIDPEDKTVYSSIQYYDDNTLNVCIESTYHFV 524

Query: 539 DKVIDEIAKLHQAAGQPLTRYHIGADETAGAWKQSPECLSFVANNDKGVKSIEDLGAYFI 598
           DKVIDEIAKLH+ AGQPLTRYHIGADETAGAW +SP+C +FVANNDKGV +  +LGAYFI
Sbjct: 525 DKVIDEIAKLHKEAGQPLTRYHIGADETAGAWLESPKCEAFVANNDKGVTNKSELGAYFI 584

Query: 599 ERISNQLAEKGIEAAGWSDGMSHVRPSYMPAKVQSNIWDVIAYKGYEHANQQVNNGWDVV 658
           ER++N L +KGIE AGWSDGMSH RP  MPA  QSNIWDV+A+KG++ A++Q N GW++V
Sbjct: 585 ERVANVLHDKGIEPAGWSDGMSHTRPEKMPAMNQSNIWDVVAHKGHQRAHKQANLGWEIV 644

Query: 659 LSNPEVLYFDFPYEADPKEHGYYWASRATNAHKVFSFMPDNLVANAEQWTDLQNLPFEAD 718
           LSNPEVLYFDFPYEADPKEHGYYWASRATN+ KVF FMP NL ANAEQW D++N PFEAD
Sbjct: 645 LSNPEVLYFDFPYEADPKEHGYYWASRATNSQKVFGFMPGNLPANAEQWLDIENNPFEAD 704

Query: 719 DRARTDEKGK-KSGPREQGKNFAGLQGQLWSETIRSNDTVEYMIFPRLLMLAERAWHQAE 777
           D  + DE GK  S P + GK F G+QGQLWSETIRS++  +YMIFPRLLMLAERAWH+  
Sbjct: 705 DTKQQDEAGKVLSEPMQPGKAFYGVQGQLWSETIRSDEQAQYMIFPRLLMLAERAWHKPG 764

Query: 778 WEVPYQYQGALYNQSTGHFTAAMRDAQAQSWQQMANTLGHKEFIKLDKAGIDYRVPTVGA 837
           WEVPY ++GALYNQS+G F+A  R  QA  WQQMANTLGHKE  KLD AG+ YRVPTVGA
Sbjct: 765 WEVPYNHEGALYNQSSGSFSAEARALQAADWQQMANTLGHKELAKLDLAGVHYRVPTVGA 824

Query: 838 KIQGGKLFANVAYPGLKMEFRQANGQWQAYQAGQAVT-APVEIRAIAADGIRKGRSLIV 895
           +I+ GKL AN+A+PGL +E+R+A+G WQ Y A   VT  PVE+R IAADG RKGR+L V
Sbjct: 825 RIEDGKLSANIAFPGLGIEYREADGNWQPYLAPVVVTKLPVEVRGIAADGKRKGRTLKV 883