Pairwise Alignments

Query, 896 a.a., beta-hexosaminidase b precursor (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 732 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

 Score =  148 bits (373), Expect = 1e-39
 Identities = 153/584 (26%), Positives = 226/584 (38%), Gaps = 139/584 (23%)

Query: 231 LAVNTIIPTPKTVVLHSNDKVVSLSSGIK-----------LDVASVSSPSA----EKQSF 275
           LA  +IIP P+     +N KV  L++  K           L +AS  SP+       Q F
Sbjct: 19  LAQTSIIPQPRD--FKANGKVFKLNAQTKIYYQKGLKDQALLLASALSPATGYDFALQEF 76

Query: 276 KTDQVAAALERLARLGVKESEQGLVMKLSWRQGAEGSYLLDIKPDGIKIAAGDAAGFSYA 335
           KT  +                 G+++  +     + +Y L +    IKI   ++AG  Y 
Sbjct: 77  KTVPL----------------NGIILATAKGDTNKEAYHLLVDNKQIKITGANSAGVFYG 120

Query: 336 LSSLTSLIDVQDLR----------VNAMTIEDSPRYPFRGMHIDVARNFHSKAMIFALID 385
           + SL  L+  +             +    I DSP YP+RGM +DV+R F SK  +   ID
Sbjct: 121 IQSLLQLLPAEIYNKERQKNIVWNIKGAVINDSPEYPWRGMMLDVSRYFFSKEYVLKFID 180

Query: 386 QMAAYKLNKLHLHMADDEGWRLEIDGLPELTDIGSKRCHDLEENTCLLPQLGSGPFAESS 445
            MA YK+N LH H+ DD GWRLEI   P+LT IG  R                G  AE++
Sbjct: 181 MMAMYKMNVLHFHLIDDAGWRLEIKKYPKLTSIGGWR----------------GVGAETT 224

Query: 446 VNGFYSKQDYIDILKYANARQIQVIPSMDMPGHSRAAIKSMEARYRKLLAQGKPTEAKTY 505
             G+Y+++D  +I+ YA  R ++V+P +++P H+ AAI      Y  L   G+     T 
Sbjct: 225 -GGYYTQEDIKEIVAYAAKRNVEVVPEIELPAHTLAAI----VAYPYLGCTGQQFVMPT- 278

Query: 506 LLSDAADTTVYSSVQYYNDNTLNVCMESTYQFVDKVIDEIAKLHQAAGQPLTRYHIGADE 565
               +    +Y            V  EST+ F++ V  E   L      P    HIG DE
Sbjct: 279 --QHSISKEIYC-----------VGKESTFSFLEDVFKETVSLF-----PSKYLHIGGDE 320

Query: 566 -TAGAWKQSPECLSFVANNDKGVKSIEDLGAYFIERISNQLAEKGIEAAGWSDGMSHVRP 624
                WK+  +C       + G+KS  +L  YF  R+   L + G    GW + +     
Sbjct: 321 ANYSRWKECADCQR--KKKELGLKSEAELQTYFNNRVQTILKKYGKTIVGWDEAIEEGLK 378

Query: 625 SYMPAKVQSNIWDVIAYKGYEHANQQVNNGWDVVLSNPEVLYFDFPYEADPKEHGYYWAS 684
             M   + ++   ++         + V  G  +V S     YFD      P E       
Sbjct: 379 EPMVGMIWNDPKKIL---------KAVEAGHSIVQSLTSYCYFDMSEANIPGEVQTATWV 429

Query: 685 RATNAHKVFSFMPDNLVANAEQWTDLQNLPFEADDRARTDEKGKKSGPREQGKNFAGLQG 744
              +  +V+S  P  +V                      DEK K            G  G
Sbjct: 430 GPVSLERVYSLNP--MVKG-------------------LDEKYK--------GQILGASG 460

Query: 745 QLWSETI---------------RSNDTVEYMIFPRLLMLAERAW 773
            LW++                 RS    +Y+  PRL  LAE  W
Sbjct: 461 TLWADQFIHGNKLPEFAPLNENRSEKYFDYLALPRLSALAEVCW 504