Pairwise Alignments

Query, 896 a.a., beta-hexosaminidase b precursor (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 737 a.a., family 20 glycosylhydrolase from Dyella japonica UNC79MFTsu3.2

 Score =  154 bits (389), Expect = 2e-41
 Identities = 150/547 (27%), Positives = 235/547 (42%), Gaps = 113/547 (20%)

Query: 236 IIPTPKTVVLHSNDKVVSLSSGIKLDVASVSSPSAEKQSFKTDQVAAALERLARLGVKES 295
           ++P P+ V       V+    GI+   A   + S E  +F  D    A+E  A + +  +
Sbjct: 28  LVPYPQHVEEGKGSFVLDPKVGIE---APADARSKEIAAFLHD----AVEAQAGIDLHMA 80

Query: 296 EQG--LVMKLSWRQGAEGSYLLDIKPDGIKIAAGDAAGFSYALSSLTSLIDVQ-----DL 348
            +G  + ++L      E +Y L++ P GI+I A    G  + + +L  L+         +
Sbjct: 81  GKGRRIALRLDPALAGEEAYRLEVTPRGIEIRASTDQGLFWGVQTLRQLLPPDASGSAKV 140

Query: 349 RVNAMTIEDSPRYPFRGMHIDVARNFHSKAMIFALIDQMAAYKLNKLHLHMADDEGWRLE 408
            +  + IED+P + +RG  +DV R+F+  + +   +D M+ YKLN    H+ +D+GWR+E
Sbjct: 141 TIPTVRIEDAPAFGYRGHMLDVGRHFYPVSFVKKQLDLMSYYKLNVFRWHLTEDQGWRIE 200

Query: 409 IDGLPELTDIGSKRCHDLEENTCLLPQLGSGPFAESSVNGFYSKQDYIDILKYANARQIQ 468
           I   P+LT++G+ R                G    S   GFY+++   ++++YA  R I 
Sbjct: 201 IKRYPKLTEVGAWRTE------------ADG----SRYGGFYTQEQIREVVEYARQRNIM 244

Query: 469 VIPSMDMPGHSRAAIKSMEARYRKLLAQGKPTEAKTYLLSDAADTTVYSSVQYYNDNTLN 528
           VIP ++MPGHS AA+    A Y +L    KP    T          V+S V    D    
Sbjct: 245 VIPEIEMPGHSSAAV----AAYPELSCAKKPIAVPT-------GWGVFSDVFCPAD---- 289

Query: 529 VCMESTYQFVDKVIDEIAKLHQAAGQPLTRYHIGADET-AGAWKQSPECLSFVANNDKGV 587
              E+ Y F+  V+DE+  L      P    HIG DE  AGAW    +C   +   ++G+
Sbjct: 290 ---ENVYVFLQNVLDEVLPLF-----PSPYVHIGGDEVPAGAWSHCEDCDKLI--REQGL 339

Query: 588 KSIEDLGAYFIERISNQLAEKGIEAAGWSDGMSHVRPSYMPAKVQSNIWDVIAYKGYEHA 647
           ++   L +YFI R+   LA KG    GW + +        PA V      V  ++G    
Sbjct: 340 ENEAGLQSYFIRRMQVYLAGKGKTMIGWDEVL---EGGVDPAAV------VEVWRGDAGL 390

Query: 648 NQQVNNGWDVVLSNPEVLYFDFPYEADPKEHGYYWASRATNAHKVFSFMPDNLVANAEQW 707
            +   NG  V+ ++P   Y D P             +R T   K++   P          
Sbjct: 391 GKAFANGNRVINASP--YYLDSP------------LTRLT-VEKLYLVDP---------- 425

Query: 708 TDLQNLPFEADDRARTDEKGKKSGPREQGKNFAGLQGQLWSETIRSND-TVEYMIFPRLL 766
             L N  F                   Q K   G +  LWSE  R++    E  ++PRLL
Sbjct: 426 --LGNADF------------------AQSKQVLGAEAPLWSE--RADPLNAEQRLYPRLL 463

Query: 767 MLAERAW 773
             AER W
Sbjct: 464 AFAERLW 470