Pairwise Alignments

Query, 896 a.a., beta-hexosaminidase b precursor (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 935 a.a., beta-N-acetylhexosaminidase (RefSeq) from Shewanella sp. ANA-3

 Score = 1558 bits (4034), Expect = 0.0
 Identities = 778/935 (83%), Positives = 831/935 (88%), Gaps = 39/935 (4%)

Query: 1   MSKTIAATAILFALGLSACSQGPKTVNTPAPSSAEQPTPALLTQAQLQQFGDNLGVTYRV 60
           M+KTIAATAIL ALGL+ACS  PKT   P+ SS EQ   + LTQAQLQQFGD LGV+YRV
Sbjct: 1   MNKTIAATAILLALGLTACSDAPKTEAVPSSSSVEQAKSSQLTQAQLQQFGDTLGVSYRV 60

Query: 61  LTNRPDDNCDKAAAEGRCFVAEIDFVPEVDLIGKEWAIYFSQMRPVQSVEGKEFSITHIK 120
           LTNRPDD+CDKAAAEGRCFVAEIDFVPEV+L  ++WAIYFSQMRPVQ+VE KEFSITHIK
Sbjct: 61  LTNRPDDSCDKAAAEGRCFVAEIDFVPEVELKSRDWAIYFSQMRPVQAVESKEFSITHIK 120

Query: 121 GDLYRIAPTEAFSGFSKGVKKTLRFRGELWQLSETDAMPNYYIVAGDLSPVVIASTQVKQ 180
           GDLYRIAPTEAFSGFSKG KKTL+FRGELWQLSETDAMPNYYIVAGDLSPVVIASTQV+Q
Sbjct: 121 GDLYRIAPTEAFSGFSKGEKKTLKFRGELWQLSETDAMPNYYIVAGDLSPVVIASTQVQQ 180

Query: 181 DPETRMEVRPYVEPFTDMVKQYSRTDADKLAPATASQLFSNNQNVSEDASLAVNTIIPTP 240
           DPET MEVRPYVE +TDMVKQY RT+ADKLAPAT +QLFSNNQ VSEDASLAVNTIIPTP
Sbjct: 181 DPETGMEVRPYVEAYTDMVKQYRRTEADKLAPATPAQLFSNNQQVSEDASLAVNTIIPTP 240

Query: 241 KTVVLHSNDKVVSLSSGIKLDVASVSSPSAEKQSFKTDQVAAALERLARLGVKESEQGLV 300
           + V +HS DK VSL+SGIKLD  SV++ SA +Q+   +Q+AAAL RLARLGV ESEQGL 
Sbjct: 241 QKVAIHSQDKAVSLTSGIKLDFGSVTNASAAQQALDPEQLAAALSRLARLGVNESEQGLA 300

Query: 301 MKLSWRQGAEGSYLLDIKPDGIKIAAGDAAGFSYALSSLTSLIDVQDLRVNAMTIEDSPR 360
           +KL+WRQGAEGSYLL+IK D I+IAA DAAGFSYALSSL SLIDVQDLRVNAMTIEDSPR
Sbjct: 301 VKLNWRQGAEGSYLLEIKADAIEIAAADAAGFSYALSSLASLIDVQDLRVNAMTIEDSPR 360

Query: 361 YPFRGMHIDVARNFHSKAMIFALIDQMAAYKLNKLHLHMADDEGWRLEIDGLPELTDIGS 420
           YPFRGMHIDVARNFHSKA+IF L+DQMAAYKLNKLHLHMADDEGWRLEIDGLPELTDIGS
Sbjct: 361 YPFRGMHIDVARNFHSKALIFDLLDQMAAYKLNKLHLHMADDEGWRLEIDGLPELTDIGS 420

Query: 421 KRCHDLEENTCLLPQLGSGPFAESSVNGFYSKQDYIDILKYANARQIQVIPSMDMPGHSR 480
           KRCHDLEENTCLLPQLGSGPFA+  VNGFYSKQDYIDI+KYA+ARQIQVIPSMDMPGHSR
Sbjct: 421 KRCHDLEENTCLLPQLGSGPFADVPVNGFYSKQDYIDIVKYADARQIQVIPSMDMPGHSR 480

Query: 481 AAIKSMEARYRK---------------------------------------LLAQGKPTE 501
           AAIK+MEARYR+                                       L A+GK T 
Sbjct: 481 AAIKAMEARYRRLQAEDVELQNTGKVQVVPVQETANQANTAVKALDAGARQLQAEGKTTA 540

Query: 502 AKTYLLSDAADTTVYSSVQYYNDNTLNVCMESTYQFVDKVIDEIAKLHQAAGQPLTRYHI 561
           A+ YLLSDA D TVYSSVQYYNDNTLNVCMESTYQFV+KVIDEIAKLHQAAGQPLTRYHI
Sbjct: 541 AEQYLLSDANDKTVYSSVQYYNDNTLNVCMESTYQFVNKVIDEIAKLHQAAGQPLTRYHI 600

Query: 562 GADETAGAWKQSPECLSFVANNDKGVKSIEDLGAYFIERISNQLAEKGIEAAGWSDGMSH 621
           GADETAGAWKQSP CL FVANNDKGVKSI+DLGAYFIERIS  LA KGIEA GWSDGMSH
Sbjct: 601 GADETAGAWKQSPACLEFVANNDKGVKSIDDLGAYFIERISTMLAAKGIEAGGWSDGMSH 660

Query: 622 VRPSYMPAKVQSNIWDVIAYKGYEHANQQVNNGWDVVLSNPEVLYFDFPYEADPKEHGYY 681
           VRPS MPAKVQSNIWDVIAYKGYEHANQQVNNGWDVVLSNPEVLYFDFPYEADPKEHGYY
Sbjct: 661 VRPSNMPAKVQSNIWDVIAYKGYEHANQQVNNGWDVVLSNPEVLYFDFPYEADPKEHGYY 720

Query: 682 WASRATNAHKVFSFMPDNLVANAEQWTDLQNLPFEADDRARTDEKGKKSGPREQGKNFAG 741
           WASRATNAHKVFSFMPDNLVANAEQWTD+QNLPFEADDRARTDEKGK+SGPREQGK FAG
Sbjct: 721 WASRATNAHKVFSFMPDNLVANAEQWTDIQNLPFEADDRARTDEKGKQSGPREQGKAFAG 780

Query: 742 LQGQLWSETIRSNDTVEYMIFPRLLMLAERAWHQAEWEVPYQYQGALYNQSTGHFTAAMR 801
           LQGQLWSETIRS++TVEYMIFPRLLMLAERAWHQA WEVPYQYQGALYNQ+TGHFTA MR
Sbjct: 781 LQGQLWSETIRSDNTVEYMIFPRLLMLAERAWHQAAWEVPYQYQGALYNQTTGHFTALMR 840

Query: 802 DAQAQSWQQMANTLGHKEFIKLDKAGIDYRVPTVGAKIQGGKLFANVAYPGLKMEFRQAN 861
           +AQAQSWQQMANTLGHKEFIKLDK GIDYRVPTVGA+I+ GKLFANVAYPGLK+E+RQ +
Sbjct: 841 EAQAQSWQQMANTLGHKEFIKLDKVGIDYRVPTVGAEIRDGKLFANVAYPGLKIEWRQTS 900

Query: 862 GQWQAYQAGQAVTAPVEIRAIAADGIRKGRSLIVN 896
           GQWQ+YQAGQ+VT  VEIRAIAADG RKGRSL+VN
Sbjct: 901 GQWQSYQAGQSVTGSVEIRAIAADGKRKGRSLVVN 935