Pairwise Alignments

Query, 395 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 408 a.a., DUF5009 domain-containing protein from Pedobacter sp. GW460-11-11-14-LB5

 Score =  257 bits (656), Expect = 5e-73
 Identities = 161/397 (40%), Positives = 231/397 (58%), Gaps = 32/397 (8%)

Query: 27  KPRLMSLDALRGFDMFWILGGEALFGALL--------IFTGWAGWQWG------------ 66
           K RL+SLDALRGFDMFWI+ GE +F  L         +    + W+              
Sbjct: 16  KKRLLSLDALRGFDMFWIISGEGIFHGLASGVMKEHALIRDPSDWKIATKKSLSFFEELL 75

Query: 67  ---DTQMHHSEWHGFRLYDLIFPLFIFLSGVALGLS-PKRLDKLPLHERLP--VYRHGVK 120
                Q+HHS W+GF  YDLIFPLFIF+SGVA+  S  K L     ++     +Y   ++
Sbjct: 76  IGISNQLHHSTWNGFTFYDLIFPLFIFISGVAMPFSYEKHLSTKHDNQNSAKSIYTALIR 135

Query: 121 RLFLLLLLGILYNHGWGTGAPVDPDKIRYASVLGRIAFAWFFAALLVWHTSLRTQVLVAV 180
           R  +L++LG++ N   G       +  R+ASVLGRIA + FFAAL+  + S   Q++   
Sbjct: 136 RTLILIILGMVVN---GLLKWQGYEATRFASVLGRIALSTFFAALIYLNFSRNQQIIWLA 192

Query: 181 GILVGYGAMQLWLPFPGGQAGVLSPTVSINAYVDSLLLPGVSYQGRMPDPEGVLSTLPAV 240
           GILVGY    + +P PG    VL+P  ++ AY+D L LPG  ++  + DPEG+LST+PA+
Sbjct: 193 GILVGYYIFMIMIPVPGFGNAVLTPEGNLAAYIDRLWLPGKLHRS-VYDPEGLLSTIPAI 251

Query: 241 VNALAGVFVGHFI-VKSHPKGEWAKVGLLGAAGGVCLALGWLLDAVIPVNKELWTSSFVL 299
             AL GVF G F+  K++      KV LL  AG V +  G   +   P+NK +WTSSFVL
Sbjct: 252 ATALLGVFTGSFLHSKNNRFTPNKKVILLLTAGLVLIFAGLFWNIFFPINKNMWTSSFVL 311

Query: 300 VTSGWSMLLLALFYALVDVLKWQKLVFVFVVIGTNAIIIYL-ASSLVDWKYIAQSVFGGV 358
           +T G+S++LLALFY ++D+   QK    F+ IGTN+I+IY+ A  L +++  +Q +FGG+
Sbjct: 312 LTGGFSVILLALFYYIIDISGHQKWSTPFIWIGTNSILIYVCAHGLFNFESTSQFLFGGI 371

Query: 359 IAVLPEYAQPLGAVVSLLNVQWLVLYWMYRRKIFVRI 395
           I  LP   Q  G    +L +Q  +L ++Y RK F++I
Sbjct: 372 ITKLPLIWQQAGLWTGVLLIQLAILKFLYDRKWFLKI 408