Pairwise Alignments

Query, 435 a.a., N-acetyl glucosamine transporter, NagP (from data) from Shewanella oneidensis MR-1

Subject, 389 a.a., glucose/galactose transporter (RefSeq) from Shewanella amazonensis SB2B

 Score =  185 bits (469), Expect = 2e-51
 Identities = 138/420 (32%), Positives = 212/420 (50%), Gaps = 52/420 (12%)

Query: 18  VAALFFILGFATWLNGSLMPYLKQILQLNPFQASLILFSFYIAVTFTALPSAWVIRKVGY 77
           +  LFFI GF T LN  L+P+LK   +L+  QA L+ F F+ A    +  +  +I K+GY
Sbjct: 1   MTTLFFIWGFITALNDILIPHLKAAFELSYTQAMLVQFCFFGAYFIVSPFAGKLIEKIGY 60

Query: 78  KNGMALGMGVMMIAGLLFIPAAKTQVFALFLFAQLVMGAGQTLLQTAVNPYVVRLGPEES 137
             G+  G+  M    LLF PAA+  V+ALFL    V+ +G T+LQ + NPYV  LG E +
Sbjct: 61  IRGIVTGLCTMATGCLLFYPAAEVSVYALFLLGLFVLASGITILQVSANPYVAILGAERT 120

Query: 138 AAARVSVMGILNKGAGVIAPLVFSALILDSFKDRIGTTLTQVQIDEMANGLVLPYLGMAV 197
           AA+R+S+   +N     +APL  +ALI  +  +              A+ + LPYL +A 
Sbjct: 121 AASRLSLAQAINSLGHTLAPLFGAALIFGAASN--------------AHAVQLPYLILAG 166

Query: 198 FIGILALAVKKSPLPELSNEDEVADHTDKSQIKAALSHPNLALGVLALFVYVAVEVIAGD 257
            + + A+      LP L  + E    T  S   +   H +L LG LA+F+YV  EV  G 
Sbjct: 167 AVLLTAVGFVFLKLPTLQTDHE----TQVSHSDSIWQHKHLVLGALAIFLYVGAEVSVGS 222

Query: 258 TIGTF-----ALSLGIDHYGVMTSY----TMVCMVLGYILGILLIPRVISQPTALMISAI 308
            +  +       +L       M SY     MV   +G  L  +L P  +    ALM  AI
Sbjct: 223 FLVNYFSESHIAALSEQEASRMVSYYWGGAMVGRFVGSALTRILQPTYVLATNALM--AI 280

Query: 309 LGLLLTLGILFGDNNSYAIANLLLVPFGGVALPDTLLLIAFLGLANAIVWPAVWPLALSG 368
           L L+LT+      N+S A+A               +  +  +G  N+I++P ++ LA+ G
Sbjct: 281 LLLVLTM------NSSGALA---------------MWSVLAVGFFNSIMFPTIFTLAIRG 319

Query: 369 MGKLTSTGSALLIMGIAGGAFGPVSWGLMSSATDMGQQGGYMVMLPCYLFILFYAVKGHK 428
           +G LTS GS LL   I GGA  P+  G+++ ++ +  Q  +++ +  YL+I +YA++G K
Sbjct: 320 LGPLTSRGSGLLCQAIVGGAILPLLQGVVADSSSV--QFSFVIPMVAYLYIGWYALRGSK 377