Pairwise Alignments

Query, 435 a.a., N-acetyl glucosamine transporter, NagP (from data) from Shewanella oneidensis MR-1

Subject, 386 a.a., glucose/galactose transporter (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  246 bits (627), Expect = 1e-69
 Identities = 153/418 (36%), Positives = 238/418 (56%), Gaps = 40/418 (9%)

Query: 21  LFFILGFATWLNGSLMPYLKQILQLNPFQASLILFSFYIAVTFTALPSAWVIRKVGYKNG 80
           +FF LGFA  +N  L+P LK  L+++  ++ LI+ + +I       P+   I+K+GYK  
Sbjct: 1   MFFSLGFALGINSVLVPVLKGSLEISSAESYLIIAATFIPFLIFGYPAGLTIKKIGYKRT 60

Query: 81  MALGMGVMMIAGLLFIPAAKTQVFALFLFAQLVMGAGQTLLQTAVNPYVVRLGPEESAAA 140
           M L   +  IA  LFIP+A  + F LFL A  + G+    LQ AVNPY+  LGP +SAA 
Sbjct: 61  MVLSFLMFAIAFGLFIPSASYESFPLFLLASFISGSANAYLQAAVNPYITILGPIDSAAK 120

Query: 141 RVSVMGILNKGAGVIAPLVFSALILDSFKDRIGTTLTQVQIDEMANGLVLP-YLGMAVFI 199
           R+S+MGI NK A  I PL  + L        IG  +T + + +    L LP Y+ +A FI
Sbjct: 121 RISIMGICNKLAWPIPPLFLAFL--------IGKEVTDITVAD----LFLPFYVIIAAFI 168

Query: 200 GILALAVKKSPLPEL-----SNEDEVADHTDKSQIKAAL-SHPNLALGVLALFVYVAVEV 253
             L +    +PLPE+      + +E A+    +  K ++   P+L LG LALF+YV VE 
Sbjct: 169 A-LGIIAYMAPLPEVKAVGEDDSEEAAEACPYAAKKTSIWQFPHLLLGCLALFLYVGVET 227

Query: 254 IAGDTIGTFALSLGIDHYGVMTSYTMVCMVLGYILGILLIPRVISQPTALMISAILGLLL 313
           ++  T+  +A SL +++  +      + +V+GYI GI+ IP+ +SQ TAL I ++L +  
Sbjct: 228 VSLGTLVDYATSLHLENAAMYAWIAPIGIVIGYICGIIFIPKYMSQATALKICSVLAI-- 285

Query: 314 TLGILFGDNNSYAIANLLLVPFGGVALPDTLLLIAFLGLANAIVWPAVWPLALSGMGKLT 373
                        I ++L+V         ++  I+F+ L  +++WPA+WPLA++ +GK T
Sbjct: 286 -------------IGSVLVVL---TPADISIYFISFMALGCSLMWPALWPLAMADLGKFT 329

Query: 374 STGSALLIMGIAGGAFGPVSWGLMSSATDMGQQGGYMVMLPCYLFILFYAVKGHKMRS 431
            +GS+LLIM +AGGA  P  +G +   +D+  Q  Y + LPC+LFIL+Y V G+K+R+
Sbjct: 330 KSGSSLLIMAMAGGAVIPTLFGYLKDISDI--QKAYWICLPCFLFILYYGVAGYKIRT 385