Pairwise Alignments

Query, 435 a.a., N-acetyl glucosamine transporter, NagP (from data) from Shewanella oneidensis MR-1

Subject, 438 a.a., glucose/galactose transporter (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  318 bits (815), Expect = 2e-91
 Identities = 172/444 (38%), Positives = 273/444 (61%), Gaps = 31/444 (6%)

Query: 6   SQQKSSFLPMAIVAALFFILGFATWLNGSLMPYLKQILQLNPFQASLILFSFYIAVTFTA 65
           +++K+ ++ +AI+A +FFI GF +W+N  L+PY +   +L  F++  + F+FYIA    A
Sbjct: 8   ARKKTYYISLAILAGMFFIFGFVSWVNSILIPYFRISCELTHFESYFVAFAFYIAYFVMA 67

Query: 66  LPSAWVIRKVGYKNGMALGMGVMMIAGLLFIPAAKTQVFALFLFAQLVMGAGQTLLQTAV 125
           +PS  +++KVG+K G+  G  +  +   +F+PAA  + F +FL     +G G  +LQTA 
Sbjct: 68  IPSGILLKKVGFKKGIMYGFMLTALGAFIFVPAALARQFEIFLIGLFSIGTGLAILQTAA 127

Query: 126 NPYVVRLGPEESAAARVSVMGILNKGAGVIAPLVFSALILDSFKDRIGTTLTQVQIDE-- 183
           NPYV  +GP +SAA R+S+MGI NK AG+I+PL+F+ALIL +    +   +    +DE  
Sbjct: 128 NPYVTIIGPIDSAARRISIMGICNKVAGIISPLIFAALILKANDSELFALIESGALDEAT 187

Query: 184 ---MANGL----VLPYLGMAVFIGILALAVKKSPLPELSNEDEVA------DHTDKSQIK 230
              M N L    ++PY+ + + + +  + ++ S LPE++ +++ A       HTDK   K
Sbjct: 188 KNAMLNELIQRVIIPYIILGIILLLTGIGIRYSVLPEINTDEQNATDEQDNKHTDK---K 244

Query: 231 AALSHPNLALGVLALFVYVAVEVIAGDTIGTFALSLGID--HYGVMTSYTMVCMVLGYIL 288
           + L  P L LG LA+F +V  +VIA DTI  +A S+G+D     V  SYT+ C ++GYIL
Sbjct: 245 SILDFPYLILGALAIFFHVGTQVIAIDTIINYANSMGMDLLEAKVFPSYTLGCTMIGYIL 304

Query: 289 GILLIPRVISQPTALMISAILGLLLTLGILFGDNNSYAIANLLLVPFGGVALPDTLLLIA 348
           GI+LIP+ ISQ  AL+   +LGL L+ G+++ D +        +  FG  A      L A
Sbjct: 305 GIILIPKYISQKNALIGCTLLGLALSFGVVWADFD--------MTLFGHQANASIFFLNA 356

Query: 349 FLGLANAIVWPAVWPLALSGMGKLTSTGSALLIMGIAGGAFGPVSWGLMSSATDMGQQGG 408
            LG  NA+++  +WPL++ G+GK T TGS+LLIMG+ G A  P+ +G    A     + G
Sbjct: 357 -LGFPNALIYAGIWPLSIHGLGKFTKTGSSLLIMGLCGNAILPLVYG--HFADQYSLRIG 413

Query: 409 YMVMLPCYLFILFYAVKGHKMRSW 432
           Y V++PC+++++F+A+KGHK+ SW
Sbjct: 414 YWVLIPCFIYLVFFAIKGHKINSW 437