Pairwise Alignments

Query, 435 a.a., N-acetyl glucosamine transporter, NagP (from data) from Shewanella oneidensis MR-1

Subject, 438 a.a., L-fucose/D-arabinose symporter FucP (from data) from Bacteroides thetaiotaomicron VPI-5482

 Score =  132 bits (331), Expect = 3e-35
 Identities = 114/449 (25%), Positives = 200/449 (44%), Gaps = 51/449 (11%)

Query: 10  SSFLPMAIVAALFFILGFATWLNGSLMPYLKQILQLNPFQASLILFSFYIAVTFTALPSA 69
           S  +P  ++ + F + GFA  +   ++    +I +++    +L+  +FY      A P+A
Sbjct: 15  SYLIPFILITSCFALWGFANDITNPMVKAFSKIFRMSATDGALVQVAFYGGYFAMAFPAA 74

Query: 70  WVIRKVGYKNGMALGMGVMMIAGLLFIPAAKTQVFALFLFAQLVMGAGQTLLQTAVNPYV 129
             IRK  YK G+ LG+G+      LF PA  T  +  FL A  ++  G + L+T+ NPY+
Sbjct: 75  MFIRKFSYKAGVLLGLGLYAFGAFLFFPAKMTGEYYPFLIAYFILTCGLSFLETSCNPYI 134

Query: 130 VRLGPEESAAARVSVMGILNKGAGVIAPLVFSALILDSFKDRIGTTLTQVQIDEMANG-- 187
           + +G EE+A  R+++    N   G +  +  +   + +    +GT    +  D       
Sbjct: 135 LSMGTEETATRRLNLAQSFNP-MGSLLGMYVAMQFIQAKLHPMGTDERALLNDSEFQAIK 193

Query: 188 ------LVLPYLGMAVFIGILALAVKKSPLPELSNEDEVADHTDKSQIKAALSHPNLALG 241
                 L+ PYL + + I  + L ++   +P+  +++   D      +K   +      G
Sbjct: 194 ESDLAVLIAPYLIIGLVILAMLLLIRFVKMPKNGDQNHKIDFF--PTLKRIFTQTRYREG 251

Query: 242 VLALFVYVAVEVIAGDTIGTFALSLGID-HYG--------VMTSYTMVCMVLGYILGIL- 291
           V+A F YV V+++    I  +   L +   YG        +   Y +V MV+  I   + 
Sbjct: 252 VIAQFFYVGVQIMCWTFIIQYGTRLFMSPEYGMDEKSAEVLSQQYNIVAMVIFCISRFIC 311

Query: 292 -LIPRVISQPTALMISAILGLLLTLGILFGDNNSYAIANLLLVPFGGVALPDTLLLIAFL 350
             I R ++    LMI AI G + TLG +F  N            FG       L  +  +
Sbjct: 312 TFILRYLNAGKLLMILAIFGGIFTLGTIFLQN-----------IFG-------LYCLVAV 353

Query: 351 GLANAIVWPAVWPLALSGMGKLTSTGSALLIMGIAGGAFGPVSWGLMSSATDMGQ----- 405
               ++++P ++ +AL GMG     G+A LIM I GG+  P    L +S  DM +     
Sbjct: 354 SACMSLMFPTIYGIALKGMGDDAKFGAAGLIMAILGGSVLP---PLQASIIDMKEIASMP 410

Query: 406 --QGGYMVMLPCYLFILFYAVKGHKMRSW 432
                +++ L C+L I+ Y  +  K R+W
Sbjct: 411 AVNVSFILPLTCFLVIIGYGYRTVK-RNW 438