Pairwise Alignments

Query, 435 a.a., N-acetyl glucosamine transporter, NagP (from data) from Shewanella oneidensis MR-1

Subject, 436 a.a., glucose/galactose transporter (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  127 bits (318), Expect = 9e-34
 Identities = 112/444 (25%), Positives = 197/444 (44%), Gaps = 39/444 (8%)

Query: 6   SQQKSSFLPMAIVAALFF--ILGFATWLNGSLMPYLKQILQLNPFQASLILFSFYIAVTF 63
           +Q+K +   +AI+  +F   ++ F T L   +   LK    ++     L  F  +IA   
Sbjct: 2   TQEKKNGKIIAIITMIFLFGMISFVTNLAAPMGIVLKNQFDVSNALGMLGNFGNFIAYAV 61

Query: 64  TALPSAWVIRKVGYKNGMALGMGVMMIA-GLLFIP--AAKTQVFALFLFAQLVMGAGQTL 120
             +PS  ++++VGYK    + + +  I  G+ F+   ++    FA++L    V G    L
Sbjct: 62  MGIPSGILLQRVGYKKTALIAVAIGFIGVGIQFLSGHSSPEMAFAVYLIGAFVAGFSMCL 121

Query: 121 LQTAVNPYVVRLGPEESAAAR-VSVMGILNKGAGVIAPLVFSALILDSFKDRIGTTLTQV 179
           L T VNP + +LG E +   + + V G  N     I P+    LI  S +     T++Q+
Sbjct: 122 LNTVVNPMLNKLGGEGNKGNQLIQVGGSFNSVMATITPMFVGILIAGSIEK---ATISQI 178

Query: 180 QIDEMANGLVLPYLGMAVF-IGILALAVKKSPLPELSNEDEVADHTDKSQIKAALSHPNL 238
                     + Y  MAVF      L   + P P  +   E       + +K AL   + 
Sbjct: 179 --------FPVMYTAMAVFAFAFFVLLFVRIPEPNAAATTEPIS----TLMKGALKFRHF 226

Query: 239 ALGVLALFVYVAVEVIAGDTIGTFALSLGIDHYGVMTSYTMVCMVLGYILGILLIPRV-- 296
            LG +A+FVYV +EV    T+  F L+  ++  G   + T+   V+G    ++LI R+  
Sbjct: 227 VLGAIAIFVYVGIEVGVPGTLNLF-LTDPVEKGGAGIASTISGFVVGTYWFLMLIGRLAG 285

Query: 297 ------ISQPTALMISAILGLLLTLGILFGDNNSYAIANLLL------VPFGGVALPDTL 344
                 +S    L  ++ LGL+L    +F    +     +L       + FG   +P   
Sbjct: 286 ASLGAKVSSKAMLTFTSALGLILVFLAIFSSTGTLVNLPVLQQSATGGLSFGFAEVPINA 345

Query: 345 LLIAFLGLANAIVWPAVWPLALSGMGKLTSTGSALLIMGIAGGAFGPVSWGLMSSATDMG 404
           + +  +GL  +I+W  ++ LA+ G+GK  +  S L ++ + GG   PV  G ++     G
Sbjct: 346 MYLVLVGLCTSIMWGGIFNLAVEGLGKYLAAASGLFMVLVCGGGILPVIQGWVADVA--G 403

Query: 405 QQGGYMVMLPCYLFILFYAVKGHK 428
               Y V++    ++L+Y + G K
Sbjct: 404 FMASYWVIIAALAYLLYYGLVGCK 427