Pairwise Alignments

Query, 435 a.a., N-acetyl glucosamine transporter, NagP (from data) from Shewanella oneidensis MR-1

Subject, 423 a.a., glucose/galactose transporter (RefSeq) from Shewanella sp. ANA-3

 Score =  196 bits (499), Expect = 9e-55
 Identities = 142/420 (33%), Positives = 221/420 (52%), Gaps = 33/420 (7%)

Query: 18  VAALFFILGFATWLNGSLMPYLKQILQLNPFQASLILFSFYIAVTFTALPSAWVIRKVGY 77
           + +LFF+ GF T LN  L+P+LK +  LN  QA LI F F+ A    ++P+  +++++GY
Sbjct: 29  LTSLFFMWGFITCLNDILIPHLKAVFSLNYTQAMLIQFCFFGAYFLVSIPAGQLVKRLGY 88

Query: 78  KNGMALGMGVMMIAGLLFIPAAKTQVFALFLFAQLVMGAGQTLLQTAVNPYVVRLGPEES 137
           + G+  G+ +  I   LF PAA    + LFL A  V+ +G T+LQ A NPYV  LG  E+
Sbjct: 89  QKGIVTGLVIASIGCGLFYPAASFATYGLFLGALFVLASGITILQVAANPYVNALGSSET 148

Query: 138 AAARVSVMGILNKGAGVIAPLVFSALILDSFKDRIGTTLTQVQIDEMANGLVLPYLGMAV 197
           A++R+++    N     +AP   S LIL S    + + L Q   +  A  + LPYL +A 
Sbjct: 149 ASSRLNLTQAFNALGTTVAPFFGSILIL-SVAASVSSELAQANAE--AEVVKLPYLLLAA 205

Query: 198 FIGILALAVKKSPLPELSNE-----DEVADHTDKSQIKAALSHPNLALGVLALFVYVAVE 252
            + +LA+   K  LP +        +EV  H  K+   +AL   +L LG + +FVYV  E
Sbjct: 206 ALAVLAIIFAKLDLPVIREHSQAAAEEVQTHLGKT---SALQSMHLVLGAVGIFVYVGAE 262

Query: 253 VIAGDTIGTFALSLGIDHYGVMTSYTMVCMVLGYILGILLIPRVISQPTALMISAILGLL 312
           V    +IG+F ++   + + V          + Y  G  ++ R I   +A+M     G +
Sbjct: 263 V----SIGSFLVNFLGEAHIVGMPEEQAAHYIAYYWGGAMVGRFIG--SAVMQKIPAGTV 316

Query: 313 LTLGILFGDNNSYAIANLLLVPF---GGVALPDTLLLIAFLGLANAIVWPAVWPLALSGM 369
           L         N++  A L+LV     G VA    +  I  +GL N+I++P ++ LAL  +
Sbjct: 317 LAF-------NAFMAALLVLVAMTTSGSVA----MWAILGVGLFNSIMFPTIFSLALRDL 365

Query: 370 GKLTSTGSALLIMGIAGGAFGPVSWGLMSSATDMGQQGGYMVMLPCYLFILFYAVKGHKM 429
           G  TS GS +L + I GGA  P+  G++  A ++G Q  +++ + CY FILFY  KG KM
Sbjct: 366 GPHTSQGSGILCLAIVGGAIVPLLQGVL--ADNLGIQLAFILPVVCYGFILFYGAKGSKM 423