Pairwise Alignments

Query, 280 a.a., hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 242 a.a., Conserved hypothetical protein 2001 from Pseudomonas syringae pv. syringae B728a

 Score = 65.1 bits (157), Expect = 1e-15
 Identities = 45/176 (25%), Positives = 79/176 (44%), Gaps = 14/176 (7%)

Query: 86  VSQTAGDFAVQGGIDWSFESGFSVGAWASNLDYDTPDYNGPDIEYDFYAAYGGEVHDNLS 145
           V+ T G  +  GG+D + ESGF  G WA N+   +       +E D Y  +     + L 
Sbjct: 49  VTPTGGSGSFHGGMDLTHESGFYFGQWAPNMGLASDT----GMELDSYMGFKKPFDNTLG 104

Query: 146 YDITLYRYNYSGESDLGYFEMTAGVEFSGFRVAYWYTNDFGGSDLDYHYGELNYSYEFIE 205
           Y++ + RY+Y   S +   E  AG+     R+   ++ND G  D       +      IE
Sbjct: 105 YELGMIRYSYPDTSQIDSHEFYAGLRMRDSRIGAAFSNDVGTRD-----STVFVDLGAIE 159

Query: 206 HWSLNLHYGYS-----IGDALDDGEDFDSYSDYSVVVSTELLGLGLSLAWLGTDLS 256
              + +   Y+        +  DG   + ++D+S+ +S   LG+ ++L + G+ LS
Sbjct: 160 QLGVGVRMQYANHQFDTPQSAADGGLINGFNDWSLNLSRPWLGIDMNLIYSGSSLS 215