Pairwise Alignments

Query, 280 a.a., hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 244 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

 Score = 65.5 bits (158), Expect = 1e-15
 Identities = 64/248 (25%), Positives = 110/248 (44%), Gaps = 24/248 (9%)

Query: 48  KRLAQLAGLALTTSLFSSIA---AAEVSGNISLTNDYRFRGVSQTA-GDF-AVQGGIDWS 102
           K L  LA +A ++ + +  A      + G +++ +DY FRG S+T  GD  A+QG + WS
Sbjct: 6   KTLLVLATIACSSGVMAEEAKVFGGTLGGKLTIASDYVFRGESETMDGDVPAIQGTLSWS 65

Query: 103 FESGFSVGAWASNLDYDTPDYNGPDIEYDFYAAYGGEVHDNLSYDITLYRYNYSGESDLG 162
            ++G+  G + SN+ +  P  N   +   F    G       +YD+ ++ Y Y G S   
Sbjct: 66  NDAGWYAGFFGSNIKFADP--NLEVVTGPFIGKAGEFGESGFTYDVMVFSYLYPGASYSN 123

Query: 163 YFE--MTAGVEFSGFRVAYWYTNDFGGSDLDYHYG-----ELNYSYEFIEHWSLNLHYGY 215
           Y E  +  G +F    +    T       LD  +G      +NY+      +   +    
Sbjct: 124 YTELWLKVGRQFGQLNMQLEVT-----PTLDDWFGVAGWQGVNYAIHPSYSFDNGVQLSG 178

Query: 216 SIGDALDDGEDFDSYSDYSVVVSTELLGLGLSLAWLGTDLSSEKKV---SDGVFQNDDTV 272
           S+G    DGE  + +  +++ VS    G  L L + G+ + ++ KV      +F  DD  
Sbjct: 179 SVGYQDLDGEGAEGWGHWNLGVSKSWAGYTLDLRYHGSTVDTDHKVYGTQTEIF--DDRF 236

Query: 273 LASVSYAF 280
           +  +S AF
Sbjct: 237 VVGISKAF 244