Pairwise Alignments

Query, 280 a.a., hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 229 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  114 bits (285), Expect = 2e-30
 Identities = 81/243 (33%), Positives = 126/243 (51%), Gaps = 28/243 (11%)

Query: 50  LAQLAGLALTTSL-FSSIAA-AEVSGNISLTNDYRFRGVSQTAGDFAVQGGIDWSFESGF 107
           + +++ LAL  S  F+++ A AE  GNI ++++Y +RG+SQT    AV GG+D+S ESGF
Sbjct: 1   MTKVSTLALLLSCAFAAVPAKAEFEGNIGISSNYLWRGISQTQDSTAVDGGLDYSHESGF 60

Query: 108 SVGAWASNLDYDTPDYNGPDIEYDFYAAYGGEVHDNLSYDITLYRYNY-SGESDLGYFEM 166
             G WA+N+D+     +    E DFY  Y G++ + LS+D+    Y Y   ++D+ + E+
Sbjct: 61  YAGTWAANVDFG----DDTTFEMDFYGGYSGDITEGLSFDVGYLYYAYPDADADIDFGEV 116

Query: 167 TAGVEFSGFRVAYWYTNDFGG-------SDLDYHYGELNYSYEFIEHWSLNLHYGYSIGD 219
            A + +    V Y    + G        SD D  Y   + +    E  SL+ HYGYS GD
Sbjct: 117 YASLTWQWLTVGYALVVNGGDDMAPDDLSDDDMDYLSADVAIPLAETLSLDFHYGYSSGD 176

Query: 220 ALDDGEDFDSYSDYSVVV--STELLGLGLSLAWLGTDLSSEKKVSDGVFQNDDTVLASVS 277
                    SYSDY+V +  STEL  +  +++   TDL+          ++D  V+   S
Sbjct: 177 IALGWYGESSYSDYAVSLTKSTELGDVSFTVS--DTDLA----------EDDPKVVLRWS 224

Query: 278 YAF 280
           Y F
Sbjct: 225 YGF 227