Pairwise Alignments

Query, 280 a.a., hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 242 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  272 bits (695), Expect = 6e-78
 Identities = 137/239 (57%), Positives = 175/239 (73%), Gaps = 8/239 (3%)

Query: 47  KKRLAQLAGLALTTSLFSSIA-AAEVSGNISLTNDYRFRGVSQTAGDFAVQGGIDWSFES 105
           K +LA+L G+ LT +L S +A A E++G + + NDYRFRG+SQT   F V  GID++ +S
Sbjct: 7   KNKLAKLTGILLTGALLSPLANAGELTGEVGVANDYRFRGISQTDSGFQVSAGIDYATDS 66

Query: 106 GFSVGAWASNLDYDTPDYNGPDIEYDFYAAYGGEVHDNLSYDITLYRYNYSGE-SDLGYF 164
           GF VGAWASN+D+   D    +IE D YA Y  EV D+LS+D+T+YRYNY GE SD  YF
Sbjct: 67  GFFVGAWASNVDFGEDD--DTNIELDIYAGYYHEVSDDLSFDVTIYRYNYFGETSDYDYF 124

Query: 165 EMTAGVEFSGFRVAYWYTNDFGGSDLDYHYGELNYSYEFIEHWSLNLHYGYSIGDALDDG 224
           E T G +F GFR AYWYTND+ GSD DYHY ELNYS+EF E+WSL+LH G + GDA++D 
Sbjct: 125 EGTVGADFHGFRAAYWYTNDYSGSDYDYHYLELNYSWEFAENWSLDLHIGNNFGDAIED- 183

Query: 225 EDF---DSYSDYSVVVSTELLGLGLSLAWLGTDLSSEKKVSDGVFQNDDTVLASVSYAF 280
           EDF   DS+ DYS+ VSTE+ G GLSLAWL T+L  + +++D +F  + TVLASVSYAF
Sbjct: 184 EDFGFGDSFVDYSIGVSTEVAGFGLSLAWLDTNLDDDVQITDDLFNTEGTVLASVSYAF 242