Pairwise Alignments

Query, 280 a.a., hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 271 a.a., TorF family putative porin from Ralstonia sp. UNC404CL21Col

 Score = 80.1 bits (196), Expect = 5e-20
 Identities = 71/255 (27%), Positives = 122/255 (47%), Gaps = 23/255 (9%)

Query: 45  LQKKRLAQLAGLALTTSLFSSIAAAEVSGNISLTNDYRFRGVSQTAGDFAVQGGIDWS-- 102
           + +  +AQ A  A   +   + A A ++ N++L + YR+RG+ QT    A+QGG D++  
Sbjct: 20  VSQSAIAQSAPAADAPAAAPAPAPAALTANVTLASQYRYRGIMQTNNKPAIQGGFDYAIP 79

Query: 103 ---FESGFSVGAWASNLDY--DTPDYNGPDIEYDFYAAYGGEVHDNLSYDITLYRYNYSG 157
                 GF VG W S++ +  D+       IE DFYA Y  E+  ++  D+ + +Y Y G
Sbjct: 80  GGVLPEGFYVGNWNSSISWLSDSNSNVSAPIEMDFYAGYKTEIIKDVPIDVGVLQYYYPG 139

Query: 158 ESDLGYF--EMTAGVEFSG-----FRVAYWYTNDFGGSDLDY-HYGELNYSYEFIEHW-- 207
               G+     T G    G     F+ ++ ++N FG  D  +  Y +L+ +++    W  
Sbjct: 140 SYPDGFTRPHTTEGYAQIGYGPVTFKYSHAFSNLFGTPDSHHSQYFDLSGNFD-TGFWGL 198

Query: 208 SLNLHYGYSIGDALDDGEDFDSYSDYSVVVSTEL-LGLGLSLAWLGTDLSSEKKVSD-GV 265
           +LNLH GY     +       SY+D+ V V+ +   G   SLA++ T+ +     +  G 
Sbjct: 199 TLNLHAGY---QQVPHQAVRASYADWKVGVTKDFGNGWAASLAYIDTNAARAFYTNTRGN 255

Query: 266 FQNDDTVLASVSYAF 280
           +    T L S++  F
Sbjct: 256 YMGKATALLSITKTF 270