Pairwise Alignments

Query, 280 a.a., hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 269 a.a., TorF family putative porin from Ralstonia sp. UNC404CL21Col

 Score = 66.2 bits (160), Expect = 7e-16
 Identities = 68/243 (27%), Positives = 100/243 (41%), Gaps = 38/243 (15%)

Query: 47  KKRLAQLAGLALTTSLFSSIAAAEVSG-------NISLTNDYRFRGVSQTAGDFAVQGGI 99
           +K  A L G A   +   ++A    +G       N S+ + Y  RG+ QT G  A+Q G+
Sbjct: 4   RKVTAMLGGAAACAAALPALADEVPAGDDRRWSANASVVSQYVSRGLRQTWGKPALQAGV 63

Query: 100 DWSFESGFSVGAWASNLDYDTPDYNGPDIEYDFYAAYGGEVHDNLSYDITLYRYNYSG-- 157
           D++  SGF  G W S +        G   E D Y  Y   V   +     LYRY Y G  
Sbjct: 64  DYTSPSGFYAGVWGSQVSDHV--IAGAHAEIDTYLGYATTVAHGVELTTGLYRYWYPGAR 121

Query: 158 ---------ESDLGYFEMTAGVEFSGFRVAYWYT--NDFG--GSDL---------DYHYG 195
                     +   Y E   G  + G  V  W T  N FG  G+ L            Y 
Sbjct: 122 YDKAAGGGPATGYDYTEWMVGAGWRGVSVRLWTTLSNYFGFDGNSLADGIDRGSRGSTYA 181

Query: 196 ELNYSYEFIEHWSLNLHYGYSIGDALDDGEDFDSYSDYSVVVSTEL-LGLGLSLAWLGTD 254
           E N++     +++L LH G+   + + +   F S++DY V +S  +   + LS A  G D
Sbjct: 182 EANWAVPLPNNFTLGLHVGH---EHVRNHSAF-SFTDYRVELSRPINKFVTLSAALTGAD 237

Query: 255 LSS 257
            S+
Sbjct: 238 ASA 240