Pairwise Alignments

Query, 280 a.a., hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 265 a.a., TorF family putative porin from Ralstonia sp. UNC404CL21Col

 Score = 87.8 bits (216), Expect = 2e-22
 Identities = 74/249 (29%), Positives = 124/249 (49%), Gaps = 23/249 (9%)

Query: 50  LAQLAGLALTTSLFSSIAAAEVS---GNISLTNDYRFRGVSQTAGDFAVQGGIDWSFESG 106
           L+  A  A +T    + AAA  S    N++L + YR+RG+ QT    A+QGG+D++  +G
Sbjct: 22  LSSAAAFAQSTDAAPAPAAAPASPLTANVTLASQYRYRGLMQTNNKPAIQGGVDYALPNG 81

Query: 107 FSVGAWASNLDY---DTPDYNGPDIEYDFYAAYGGEVHDNLSYDITLYRYNYSGESDLGY 163
           F VG W S++ +     P+ + P IE DFY  Y  E+  ++  D+ + +Y Y G    GY
Sbjct: 82  FYVGNWNSSISWLGDSNPNVSAP-IEMDFYGGYKTELMKDVPIDVGVLQYYYPGSYPDGY 140

Query: 164 F--EMTAGVEFSG-----FRVAYWYTNDFGGSDLDY-HYGELNYSYEFIEHW--SLNLHY 213
                T G    G     F+ ++ ++N FG +D  +  Y +L+ +++    W  +LNLH 
Sbjct: 141 TRPHTTEGYAQIGYGPVSFKYSHAFSNLFGFADSHHSQYFDLSGNFD-TGFWGLTLNLHV 199

Query: 214 GYSIGDALDDGEDFDSYSDYSVVVSTEL-LGLGLSLAWLGTDLSSEKKVSD-GVFQNDDT 271
           GY     +       SY+D+ V V+ +   G   SLA++ T+ +     +  G +    T
Sbjct: 200 GY---QQVPHQVVRTSYADWKVGVTKDFGSGWTASLAYIDTNAARAAYTNTRGNYMGKAT 256

Query: 272 VLASVSYAF 280
            L +V+  F
Sbjct: 257 ALLAVTKTF 265