Pairwise Alignments

Query, 280 a.a., hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 248 a.a., hypothetical protein (RefSeq) from Shewanella sp. ANA-3

 Score = 67.8 bits (164), Expect = 2e-16
 Identities = 63/225 (28%), Positives = 107/225 (47%), Gaps = 27/225 (12%)

Query: 71  VSGNISLTNDYRFRGVSQTA-GDF-AVQGGIDWSFESGFSVGAWASNLDYDTPDYNGPDI 128
           ++GN++  +DY FRG S+T  GD   VQG + W+   G+  G ++SN+ +  P+    +I
Sbjct: 36  INGNLNFASDYVFRGESETLDGDIPVVQGTLSWNHNQGWYAGVFSSNIKFADPNL---EI 92

Query: 129 EYDFYAAYGGEVHDN-LSYDITLYRYNYSGESDLGYFE--MTAGVEFSGFRVAYWYT--- 182
               +    GE  D+  +YD+ L+ Y Y G S   Y E  +  G +F    +    T   
Sbjct: 93  VTAPFIGKAGEFGDSGFTYDVMLFSYLYPGASYSNYTELWLKVGKQFGRANLQLEVTPTV 152

Query: 183 NDFGGSD----LDYHYGELNYSYEFIEHWSLNLHYGYSIGDALDDGEDFDSYSDYSVVVS 238
           +D+ G D    ++Y    L+ SY F     ++   GY   D   DG   + +  +++ +S
Sbjct: 153 DDWFGVDGWHGVNY---ALHPSYSFDNGVKISASVGYQ--DLSGDGA--EGWGHWNIGLS 205

Query: 239 TELLGLGLSLAWLGTDLSSEKKV---SDGVFQNDDTVLASVSYAF 280
               GL   L + G+ + S+ KV      +F  DD V+  +S +F
Sbjct: 206 KAYYGLNFDLRYHGSTVDSDHKVYGTQTEIF--DDRVVIGISKSF 248