Pairwise Alignments

Query, 280 a.a., hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 240 a.a., hypothetical protein (RefSeq) from Shewanella sp. ANA-3

 Score =  434 bits (1116), Expect = e-127
 Identities = 201/240 (83%), Positives = 226/240 (94%)

Query: 41  VNNNLQKKRLAQLAGLALTTSLFSSIAAAEVSGNISLTNDYRFRGVSQTAGDFAVQGGID 100
           +NNNL KKRLAQ+ GLALTTSLFS IAAAEVSG IS+TNDYRFRG+SQTAGD AVQGG+D
Sbjct: 1   MNNNLNKKRLAQVVGLALTTSLFSGIAAAEVSGEISVTNDYRFRGISQTAGDPAVQGGVD 60

Query: 101 WSFESGFSVGAWASNLDYDTPDYNGPDIEYDFYAAYGGEVHDNLSYDITLYRYNYSGESD 160
           WSFESGFSVGAWASN+D+D P YNGPDIEYDFY AYGG+++DN+SYD+TL RYNYSGESD
Sbjct: 61  WSFESGFSVGAWASNVDFDEPGYNGPDIEYDFYVAYGGDINDNVSYDVTLNRYNYSGESD 120

Query: 161 LGYFEMTAGVEFSGFRVAYWYTNDFGGSDLDYHYGELNYSYEFIEHWSLNLHYGYSIGDA 220
           LGYFE+TAGVEFSGFRVAYWYTND+GGSDLDYHYGE+NYSYEF+E+WSL+LHYGY++GDA
Sbjct: 121 LGYFEVTAGVEFSGFRVAYWYTNDYGGSDLDYHYGEINYSYEFVENWSLDLHYGYNVGDA 180

Query: 221 LDDGEDFDSYSDYSVVVSTELLGLGLSLAWLGTDLSSEKKVSDGVFQNDDTVLASVSYAF 280
           LDDGE FDSYSDYSV VSTE +G GLSLAWLGTDLS ++KVSDGV++NDDTVLASVSYAF
Sbjct: 181 LDDGEGFDSYSDYSVGVSTEFMGFGLSLAWLGTDLSGDQKVSDGVWKNDDTVLASVSYAF 240