Pairwise Alignments

Query, 280 a.a., hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 230 a.a., hypothetical protein (RefSeq) from Shewanella sp. ANA-3

 Score =  129 bits (323), Expect = 8e-35
 Identities = 86/240 (35%), Positives = 121/240 (50%), Gaps = 29/240 (12%)

Query: 50  LAQLAGLALTTSLFSSIAAAEVSGNISLTNDYRFRGVSQTAGDFAVQGGIDWSFESGFSV 109
           LA   GL LTT+ F     A VSGNI  T++Y +RGV+QT    A+QGGID+S +SGF  
Sbjct: 9   LALSTGLLLTTNAF-----AAVSGNIGGTSNYLWRGVTQTNDSVAIQGGIDYSHDSGFYA 63

Query: 110 GAWASNLDY-DTPDYNGPDIEYDFYAAYGGEVHDNLSYDITLYRYNY-SGESDLGYFEMT 167
           G WASN+D+ D   Y     E D YA YGG + ++LSYDI    Y Y   E  + + E+ 
Sbjct: 64  GTWASNVDFGDDTSY-----ELDLYAGYGGNITEDLSYDIGYLYYAYPDAEGSIDFGELH 118

Query: 168 AGVEFSGFRVAYWYTNDFGG-------SDLDYHYGELNYSYEFIEHWSLNLHYGYSIGDA 220
             + +  F ++Y    + G         + D  Y     S+   +  SL+LHYGYS GD 
Sbjct: 119 GAITWKWFELSYSQVINAGDDVAAEPLDNKDMSYLAATASFPLTDKLSLSLHYGYSSGDV 178

Query: 221 LDDGEDFDSYSDYSVVVSTELLGLGLSLAWLGTDLSSEKKVSDGVFQNDDTVLASVSYAF 280
           ++     D+Y+DY+V +S +     +S     TDL  +          D  V+   SY F
Sbjct: 179 VESWFGEDNYADYNVTLSADTSMGTVSFMVSDTDLQGD----------DAKVVLGYSYGF 228