Pairwise Alignments

Query, 382 a.a., drug resistance transporter, Bcr/CflA family protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 398 a.a., Drug resistance transporter Bcr/CflA subfamily from Pseudomonas syringae pv. syringae B728a

 Score =  129 bits (325), Expect = 1e-34
 Identities = 104/385 (27%), Positives = 181/385 (47%), Gaps = 16/385 (4%)

Query: 1   MNIKPPLWLAVLLMMFPQIMETIYSPALPDIAEHFAVPISAAAQTLSVYFVAFAIGVFCW 60
           MN++  L L  L    P  ++  Y P  P +A +F         TL+ YF+  ++G   +
Sbjct: 1   MNLRTILILGSLSAFGPLAID-FYLPGFPAMASYFGTDEKHVQLTLAAYFLGLSLGQLAY 59

Query: 61  GRLADVIGRRKAMLAGLVCYAIGSAFALLVSDFSLLLMARVLSAFGAAVGSVITQTMMRD 120
           G +AD  GRR  +L G+  + + S           L+ AR + A G   G V+++ ++ D
Sbjct: 60  GPVADRFGRRIPLLVGVTLFMLASVACAFAPSLEWLIAARFVQALGGCAGMVLSRAIVSD 119

Query: 121 SYSGEELAKVFSVMGMSFGISPVIGLLLGSVLSAFWGYQGVFVVLMSSAIVLLFLSVKSL 180
             +  E AKVFS + +  G++P++  +LG VL + +G+Q +FV L   +   L      L
Sbjct: 120 KCNAVESAKVFSQLMLVMGLAPILAPMLGGVLVSTFGWQSIFVSLALFSGACLAAVALGL 179

Query: 181 PETKPAHTQ----TIAIGELAIKMLSDRGIIKNTLLVAAFNLMWFSYFSLAPFMF-EAQG 235
           PE+ PA T     + A+G+  + +  D   I + L         F+Y + +PF+F +  G
Sbjct: 180 PESMPATTPRQPLSGALGQY-LNLFKDGVFIGHALTGGIAMAGMFAYVAGSPFVFIKLYG 238

Query: 236 LSTLIFGMSGLLLGFGAFLGSYFNQVLLGRCCTSPRLIRLASSIALVGGVGIWLLQSTFI 295
           +    +G    +   G  L +  N  +L +  T P  + L+ ++ +    G+ LL  + +
Sbjct: 239 VPAEHYGWLFGMNAAGFILVAQINARILRK--TGPAFL-LSRTVWIYLAAGLVLLAISGL 295

Query: 296 GLNNVY-FLAPMLLIVIAYGIAIPNILSSALAGYRTYAGSAGALFGLFYYILLGAGLGVV 354
               ++  L P+ + V + G  IPN  + A+ G    AGSA AL G   + +      +V
Sbjct: 296 RTEALWPLLVPLFICVASLGCIIPNASACAMNGQWARAGSASALLGCLQFSVAAVAASLV 355

Query: 355 GLINHLGGVITLAAL---FCTVLSM 376
           G+++   G  T  AL    C VL++
Sbjct: 356 GVLH--DGTATPMALVISLCGVLTV 378