Pairwise Alignments

Query, 382 a.a., drug resistance transporter, Bcr/CflA family protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 412 a.a., transporter from Sinorhizobium meliloti 1021

 Score =  148 bits (374), Expect = 2e-40
 Identities = 106/369 (28%), Positives = 187/369 (50%), Gaps = 22/369 (5%)

Query: 9   LAVLLMMFPQIMETIYSPALPDIAEHFAVPISAAAQTLSVYFVAFAIGVFCWGRLADVIG 68
           +   L+    I   +Y+PA+P++   FA   +A   TLS+YF  FA      G L+DVIG
Sbjct: 13  IGAFLVALGPISMALYTPAMPELVRAFASSEAAIKMTLSLYFGGFAFAQLVSGTLSDVIG 72

Query: 69  RRKAMLAGLVCYAIGSAFALLVSDFSLLLMARVLSAFGAAVGSVITQTMMRDSYSGEELA 128
           RR+  L  +  Y  GS  A       +LL  R++   GA+VG  + + ++RD ++G   A
Sbjct: 73  RRRTTLIFMAIYLAGSLMAAFAPSIPVLLAGRLVQGIGASVGMTVARAIVRDQFTGTTAA 132

Query: 129 KVFSVMGMSFGISPVIGLLLGSVLSAFWGYQGVFVV-----LMSSAIVLLFLSVKSLPET 183
           ++ +++GM   + P +   LGS+    +G+Q +F++     LM+  IV LF++  + P+ 
Sbjct: 133 RIMNMIGMMLALGPAVSPTLGSIALGLFGWQSIFLLMVGFALMACFIVQLFMAETTTPDR 192

Query: 184 KPAHTQTI--AIGELAIKMLSDRGIIKNTLLVAAFNLMWFSYFSLAPFMFEAQ-GLSTLI 240
              H + I  A GEL    + D   + +TL++A      +++ ++ PF+  +Q GL+   
Sbjct: 193 SKGHFRPILAAYGEL----MRDGRFVSSTLVIAGAVGALYAWATMLPFVLISQVGLTPTE 248

Query: 241 FGMSGLLLGFGAFLGSYFNQVLLGRCCTSPRLIRLASSIALVGGVGIWLLQSTFIGLNNV 300
           FG+ G+L+  G F        L+ R  T   L+   + +  +G   +  L  T   L   
Sbjct: 249 FGI-GMLMQSGLFFSGTVTMRLMMRRFTPQALV--PAGLFFIGAASL-ALAFTMHALEPT 304

Query: 301 YFLAPMLLIVIAYGIA--IPNILSSALAGYRTYAGSAGALFGLFYYILLGAGLGVVGLIN 358
           +      + + A+GIA  +P ++++A+A +   AG+A A+ G   +I + AGL + G + 
Sbjct: 305 FLSVMTPIGIYAFGIAFVMPYMMTAAMAPFPHIAGTASAMMG---FIQMSAGL-LGGALA 360

Query: 359 HLGGVITLA 367
            L GV  +A
Sbjct: 361 ALVGVPAMA 369