Pairwise Alignments

Query, 382 a.a., drug resistance transporter, Bcr/CflA family protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 400 a.a., drug resistance transporter, Bcr/CflA family protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  120 bits (300), Expect = 9e-32
 Identities = 101/350 (28%), Positives = 169/350 (48%), Gaps = 31/350 (8%)

Query: 9   LAVLLMMFPQIMETIYSPALPDIAEHFAVPISAAAQTLSVYFVAFAIGVFCWGRLADVIG 68
           L  L+++ P  ++ IY P++P +A  F+V       TL ++  A  +G    G LAD  G
Sbjct: 9   LMSLVLLSPLAID-IYLPSMPAMALDFSVDERQVQSTLVLFLFAMGVGQVLIGPLADRYG 67

Query: 69  RRKAMLAGLVCYAIGSAFALLVSDFSLLLMARVLSAFGAAVGSVITQTMMRDSYSGEELA 128
           RR   L G V Y I S  A+   +F LL +AR+L    A   S++  + +RDSYS  + A
Sbjct: 68  RRPVALFGTVLYVISSLLAMAALEFELLQLARLLQGLAACSTSIVAFSAVRDSYSSADSA 127

Query: 129 KVFSVMGMSFGISPVIGLLLGSVLSAFWGYQGVFVVLMSSAIVLLFLSVKSLPETKPAHT 188
           +++S +  +  + P +   LG +L+  +G++  F  +    +V+L +    LPET+PAHT
Sbjct: 128 RIYSYLNGAICVIPALAPTLGGLLAIQFGWRSTFAFMAFYGLVMLLVVGYRLPETRPAHT 187

Query: 189 QTIA----IGELAIKMLSDRGIIKNTLLVAAFN--LMWFSYFSLAPFMFEAQGLSTLIFG 242
           ++       G  A  + +   +      +AA    L + SY S+  ++    G+S L F 
Sbjct: 188 ESAGPLYRWGRYAPVLKNSHFMFYAVTCMAAMAAILCYVSYSSI--WLIGKLGVSELAF- 244

Query: 243 MSGLLLGFGAFLGSYFNQVLLGRCCTSPRLIR-LASSIALVGGVGIWLLQSTFIGL---- 297
            SGL   FG  L +  N V    C  +P +IR L +   ++  +G+ +L S    +    
Sbjct: 245 -SGL---FG--LNAVVNVV---ACFAAPVVIRKLGNRPTVLVALGLMILASVLELVLQLP 295

Query: 298 -------NNVYFLAPMLLIVIAYGIAIPNILSSALAGYRTYAGSAGALFG 340
                   +  F+ PM+L+ + +   +    S ALA +   AG+A AL G
Sbjct: 296 AWASPMAASFAFMLPMMLLCVGFAFLLGPATSMALAPFGERAGTATALLG 345