Pairwise Alignments

Query, 382 a.a., drug resistance transporter, Bcr/CflA family protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 402 a.a., multidrug effflux MFS transporter from Dyella japonica UNC79MFTsu3.2

 Score =  134 bits (338), Expect = 3e-36
 Identities = 90/339 (26%), Positives = 170/339 (50%), Gaps = 9/339 (2%)

Query: 23  IYSPALPDIAEHFAVPISAAAQTLSVYFVAFAIGVFCWGRLADVIGRRKAMLAGLVCYAI 82
           +Y PALP I E     +  A  +L  +F A  IG   +G ++D++GR+  +  GLV +A+
Sbjct: 25  MYLPALPTIREALRTDVDTAQMSLMAFFAAVGIGQLIYGPVSDMVGRKPPIYFGLVLFAL 84

Query: 83  GSAFALLVSDFSLLLMARVLSAFGAAVGSVITQTMMRDSYSGEELAKVFSVMGMSFGISP 142
           GS    +  D  +L+  R +   GA  G VI + ++RD ++G + A++ S++ + F +SP
Sbjct: 85  GSIGCAMAPDIHMLIAFRFVQGLGACAGMVIPRAIVRDMHTGHDAAQLMSLLMLVFSVSP 144

Query: 143 VIGLLLGSVLSAFWGYQGVFVVLMSSAIVLLFLSVKSLPETKPAHTQTIAIGELAI---- 198
           V+  L GS++     ++G+F  +   A+  L L+  +L ET+P   +  +    A+    
Sbjct: 145 VLAPLTGSLVIRLTSWRGIFWTVAVVAVFGLVLAATALKETRPREARVASNARTALAAYG 204

Query: 199 KMLSDRGIIKNTLLVAAFNLMWFSYFSLAPF-MFEAQGLSTLIFGMSGLLLGFGAFLGSY 257
            +L D   +    + +     +F+Y + + F + +  GLS  ++G++   +   +F+G+ 
Sbjct: 205 TLLRDPHYLGLVFICSFGVASFFAYLANSSFVLIDHYGLSPTLYGLA-FSVNAVSFIGAA 263

Query: 258 FNQVLLGRCCTSPRLIRLASSIALVGGVGIWLLQSTFIGLNNVYFLAPMLLIVIAY-GIA 316
                LG+    PRL+R  S++     V + LL     G++N+  +  +L +   + G+ 
Sbjct: 264 QFTGALGKRYGLPRLVR--SAVVGYSLVMVALLLLNLAGIDNLGVMMALLFVGYGFLGLV 321

Query: 317 IPNILSSALAGYRTYAGSAGALFGLFYYILLGAGLGVVG 355
           +P+    AL  +   AG+A A  G   +      +GVVG
Sbjct: 322 MPSSAVLALEEHGKIAGTASAFLGTIQFATGACVIGVVG 360