Pairwise Alignments

Query, 382 a.a., drug resistance transporter, Bcr/CflA family protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 402 a.a., Bcr/CflA subfamily drug resistance transporter (RefSeq) from Shewanella sp. ANA-3

 Score =  123 bits (308), Expect = 1e-32
 Identities = 102/361 (28%), Positives = 174/361 (48%), Gaps = 22/361 (6%)

Query: 9   LAVLLMMFPQIMETIYSPALPDIAEHFAVPISAAAQTLSVYFVAFAIGVFCWGRLADVIG 68
           L  L+++ P  ++ IY P++P +A  FAV  S    TL ++  A  +G    G LAD  G
Sbjct: 9   LMSLVLLSPLAID-IYLPSMPTMAAEFAVSASEVQSTLVLFLFAMGVGQILIGPLADRYG 67

Query: 69  RRKAMLAGLVCYAIGSAFALLVSDFSLLLMARVLSAFGAAVGSVITQTMMRDSYSGEELA 128
           RR   L G++ Y   S  A    +F  L +ARVL    A   S++  + +RD YS +E A
Sbjct: 68  RRPVALFGVLLYGASSLLAAAAIEFHWLQLARVLQGLAACSTSIVVFSAVRDCYSPKEGA 127

Query: 129 KVFSVMGMSFGISPVIGLLLGSVLSAFWGYQGVFVVLMSSAIVLLFLSVKSLPETKPAHT 188
           +++S +  +  + P +   LG +L+  +G++  FV +   AI+++ L    LPET+PA+ 
Sbjct: 128 RIYSYLNGAICVIPALAPTLGGLLAMQFGWRSTFVFMTLYAILMMLLVGYRLPETRPAN- 186

Query: 189 QTIAIGELAIKMLSDRGIIKNT-LLVAAFNLM-----WFSYFSLAP-FMFEAQGLSTL-- 239
            T++ G L  +    + ++ NT  L  AF  M       SY S +P ++    G+S L  
Sbjct: 187 -TVSSGPL-YRWSRYKPVLSNTHFLFYAFACMSAMAAILSYVSYSPVWLIGHLGVSELAF 244

Query: 240 --IFGMSGLLLGFGAFLGSYFNQVLLGRCCTSPRLIRLASSIALVGGVGIWLLQSTFIGL 297
             +FG++ L+     F      + L  R      L+ L  S  L+     +      +G+
Sbjct: 245 SGLFGLNALVNIVACFAAPVVIRKLGNRPTAILALVLLVLSAVLIIAAQAF---GPSVGM 301

Query: 298 NNVY-FLAPMLLIVIAYGIAIPNILSSALAGYRTYAGSAGALFGLFYYILLGAGLGVVGL 356
              + F+ PM+L+ I +   +    S AL+ +   AG+A A+ G   +I +     + GL
Sbjct: 302 AAAFAFMLPMMLLCIGFAFLLGPATSMALSAFGERAGTATAMLG---FIQMSGASVIAGL 358

Query: 357 I 357
           +
Sbjct: 359 V 359