Pairwise Alignments

Query, 307 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 306 a.a., LysR family transcriptional regulator from Ralstonia sp. UNC404CL21Col

 Score =  175 bits (443), Expect = 1e-48
 Identities = 105/300 (35%), Positives = 159/300 (53%), Gaps = 12/300 (4%)

Query: 1   MDRLEAAKVFVTIVERGSMIGAAEVLDMSRSMVTRYLSEMEEWSGARLLHRSTRRLSLTS 60
           MDRL    VFV +VERGS+  AA+ + MSR ++++ L+ +E     RLL R+TRRLSLT 
Sbjct: 1   MDRLSDVVVFVQVVERGSLSAAADAMGMSRGVISKALARLETRLQTRLLQRTTRRLSLTE 60

Query: 61  AGEQVLDYCQRLLELAQEVPAVSHAQSAQPRGLLRISCSQFMAHLILPTVVRPYLAQYPQ 120
           AG    +  +  L L         A   + RG LR+S     A  +L  ++  + A+YP 
Sbjct: 61  AGAAFFEKSREGLALVDAAEQAVSALRDEARGTLRVSAPASFAVTLLAPLLGAFQARYPA 120

Query: 121 ASVNFHVSSQTVDLVAERIDMAIRITNELDPSLIARRLGECESVVCAAPRYLASHSPIIQ 180
             V+  ++ +  DLVA RID+AIRI    D SL+ARRL +C   +  AP Y         
Sbjct: 121 VQVDLDMNDRYADLVAGRIDVAIRIGMLEDSSLVARRLADCAHAIYGAPSYFRVRGIPQS 180

Query: 181 PEDLTRHNCLTY-SYFGDVMWRFTQINHLVTHPDGKSAGQQFNIPVKGNLSANDSMVVLN 239
           PEDL  HNCL Y +Y G   W  T            +AGQ+    V G++ AN+S+V+  
Sbjct: 181 PEDLRDHNCLVYANYDGPYDWVLTD-----------AAGQRHVAHVTGSMLANNSLVLRE 229

Query: 240 ATLAGEGIAMQPVWAVKSYLNSGELVPLLRDFKPQSLGVYGVYQSRKHMQPTLRVMMDML 299
           A  +G G+++ P + V+  + +G L  +L  +  + + ++ V+  R H+ P +R  +D L
Sbjct: 230 AARSGLGVSLGPAYLVRDDIAAGRLQAVLTSYTAREVPLHAVFTQRVHLLPKVRAFVDFL 289