Pairwise Alignments
Query, 555 a.a., ABC transporter, ATP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1
Subject, 540 a.a., ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021
Score = 289 bits (740), Expect = 2e-82
Identities = 169/506 (33%), Positives = 281/506 (55%), Gaps = 12/506 (2%)
Query: 32 GAKIGVLGLNGSGKSTLLRIMAGIDTEIEGEARPMPGLKIGYLPQEPKLDPNQTVREAIE 91
G KIG++G NG+GK+TL R++ G + EG+ G+ IGY Q+ ++ +
Sbjct: 27 GEKIGLVGPNGAGKTTLFRMITGQELPDEGQVAVEKGMTIGYFDQDVGEMAGRSAVAEVM 86
Query: 92 EAVSEAKNALKRLDEVYAAYAEPDA--DFDALAKEQGELEAIIQAQDAHNLDNILERAAN 149
E L E+ A ++PD + DA+ + GE++A + D + L+
Sbjct: 87 EGAGPISAVAAELHELETAMSDPDRMDEMDAIVERYGEVQARYEELDGYALEGRAREVLA 146
Query: 150 ALRLPD--WDEKIEVLSGGERRRVAICRLLLEKPEMLLLDEPTNHLDAESVAWLEHFLQE 207
L D + LSGG + RVA+ R+LL +P+++LLDEP+NHLD ES+ WLE+FL+
Sbjct: 147 GLSFSQEMMDGDVAKLSGGWKMRVALARILLMRPDVMLLDEPSNHLDLESLIWLENFLKG 206
Query: 208 YAGTVVAITHDRYFLDNAAGWILELDRGEGIPWEGNYSSWLEQKDARLKQESAAESARQK 267
Y G ++ +HDR F++ I+E+D G + G+Y + EQ+ +Q+ A +Q
Sbjct: 207 YDGALLMTSHDREFMNRIVTKIIEIDGGALTTYSGDYGFYDEQRALNARQQQAQFERQQA 266
Query: 268 TIAKELEWVR--QGAKGRQSKGKARMARFEELNTNDYQKRNETNELFIPPGPRLGDKVIE 325
+AKE++++ + S+ ++R+ + E+++ + +R +T P PR G+ V+
Sbjct: 267 MLAKEIKFIERFKARASHASQVQSRVKKLEKIDRVEPPRRRQTVAFEFLPAPRSGEDVVN 326
Query: 326 VNNLTKSYGDRVLIDNLSFSVPKGAIVGIIGANGAGKSTLFRMLSGSEQPDSGSIELGET 385
+ ++ K+YG R + D L F V + I+G NGAGKSTL ++++G+ PD GS+ LG +
Sbjct: 327 LKSVHKTYGSRTIYDGLDFMVRRRERWCIMGINGAGKSTLLKLVTGTTNPDKGSVSLGAS 386
Query: 386 VQLASVEQF-RDSMNDKNTIWQEISGGQDIMRINNMEIPSRAYVGRFNFRGGDQQKIIGT 444
V+L Q D ++ ++TI Q + + + + P RA G F F G D +K
Sbjct: 387 VKLGYFAQHSMDLLDGESTILQWLE--ERFPKAG--QAPLRALAGCFGFSGDDVEKRCRV 442
Query: 445 LSGGERNRVHLAKLLQAGGNVLLLDEPTNDLDVETLRALEEAILEFPGCAMVISHDRWFL 504
LSGGE+ R+ +A +L N L+LDEPTN LD++T L +A+ + G + +SHDR FL
Sbjct: 443 LSGGEKARLVMAAMLFDPPNFLVLDEPTNHLDLDTKEMLIKALSAYQGTMLFVSHDRRFL 502
Query: 505 DRIATHILDYRDEGQVNFYEGNYTEY 530
++ +L+ +G +N Y G Y+EY
Sbjct: 503 SALSNRVLELTPDG-INQYGGGYSEY 527
Score = 109 bits (272), Expect = 3e-28
Identities = 75/247 (30%), Positives = 123/247 (49%), Gaps = 40/247 (16%)
Query: 323 VIEVNNLTKSYGDRVLIDNLSFSVPKGAIVGIIGANGAGKSTLFRMLSGSEQPDSGSIEL 382
+I + N++KS R+L S ++ +G +G++G NGAGK+TLFRM++G E PD G + +
Sbjct: 1 MIRIENISKSNSHRILYIEASAALNRGEKIGLVGPNGAGKTTLFRMITGQELPDEGQVAV 60
Query: 383 GETVQLASVEQFRDSMNDKNTIWQEISGGQDIMRI--------NNMEIPSR-----AYVG 429
+ + + +Q M ++ + + + G I + M P R A V
Sbjct: 61 EKGMTIGYFDQDVGEMAGRSAVAEVMEGAGPISAVAAELHELETAMSDPDRMDEMDAIVE 120
Query: 430 RFN-------------FRGGDQQKIIG-------------TLSGGERNRVHLAKLLQAGG 463
R+ G ++ + G LSGG + RV LA++L
Sbjct: 121 RYGEVQARYEELDGYALEGRAREVLAGLSFSQEMMDGDVAKLSGGWKMRVALARILLMRP 180
Query: 464 NVLLLDEPTNDLDVETLRALEEAILEFPGCAMVISHDRWFLDRIATHILDYRDEGQVNFY 523
+V+LLDEP+N LD+E+L LE + + G ++ SHDR F++RI T I++ D G + Y
Sbjct: 181 DVMLLDEPSNHLDLESLIWLENFLKGYDGALLMTSHDREFMNRIVTKIIEI-DGGALTTY 239
Query: 524 EGNYTEY 530
G+Y Y
Sbjct: 240 SGDYGFY 246
Score = 89.7 bits (221), Expect = 3e-22
Identities = 64/216 (29%), Positives = 99/216 (45%), Gaps = 42/216 (19%)
Query: 37 VLGLNGSGKSTLLRIMAGIDTEIEGEARPMPGLKIGYLPQEPK--LDPNQTVREAIEEAV 94
++G+NG+GKSTLL+++ G +G +K+GY Q LD T+ + +EE
Sbjct: 355 IMGINGAGKSTLLKLVTGTTNPDKGSVSLGASVKLGYFAQHSMDLLDGESTILQWLEERF 414
Query: 95 SEAKNALKRLDEVYAAYAEPDADFDALAKEQGELEAIIQAQDAHNLDNILERAANALRLP 154
+A A R ALA G
Sbjct: 415 PKAGQAPLR----------------ALAGCFG------------------------FSGD 434
Query: 155 DWDEKIEVLSGGERRRVAICRLLLEKPEMLLLDEPTNHLDAESVAWLEHFLQEYAGTVVA 214
D +++ VLSGGE+ R+ + +L + P L+LDEPTNHLD ++ L L Y GT++
Sbjct: 435 DVEKRCRVLSGGEKARLVMAAMLFDPPNFLVLDEPTNHLDLDTKEMLIKALSAYQGTMLF 494
Query: 215 ITHDRYFLDNAAGWILELDRGEGIPWEGNYSSWLEQ 250
++HDR FL + +LEL + G YS ++E+
Sbjct: 495 VSHDRRFLSALSNRVLELTPDGINQYGGGYSEYVER 530