Pairwise Alignments
Query, 555 a.a., ABC transporter, ATP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1
Subject, 595 a.a., putative holdfast attachment protein C from Phaeobacter inhibens DSM 17395
Score = 296 bits (757), Expect = 2e-84
Identities = 176/530 (33%), Positives = 271/530 (51%), Gaps = 53/530 (10%)
Query: 21 ILKDISLSFFPGAKIGVLGLNGSGKSTLLRIMAGIDTEIEGEARPMPGLKIGYLPQEPKL 80
+ D+ L PG ++ ++G NGSGKSTL+++MAG+ +G PG +GY+ Q+P++
Sbjct: 13 VFADLDLVVQPGDRVALVGRNGSGKSTLMKVMAGLVEADKGSLVVPPGKSVGYMEQDPQM 72
Query: 81 DPNQTVREAIEEAVSEAKNALKRLDEVYAAYAEPDADFDALAKEQGELEAIIQAQDAHNL 140
T+ DF A + GE+ +
Sbjct: 73 TGFATL-----------------------------GDFAASELDPGEMYKV--------- 94
Query: 141 DNILERAANALRLPDWDEKIEVLSGGERRRVAICRLLLEKPEMLLLDEPTNHLDAESVAW 200
ERA L+ D + SGGE+RR A+ +L+ E P+++LLDEPTNHLD E++ W
Sbjct: 95 ----ERAGEGLKF-DPARPVATASGGEKRRAALAKLMAEAPDLMLLDEPTNHLDIEAITW 149
Query: 201 LEHFLQEYAGTVVAITHDRYFLDNAAGWILELDRGEGIPWEGNYSSWLEQKDARLKQESA 260
LE+ L+ V I+HDR FL L +DRG+ E + ++ +D ++E
Sbjct: 150 LENELKSTRAAFVLISHDRAFLRALTRATLWVDRGQVRRQEKGFDAFEAWRDKIWEEEDQ 209
Query: 261 AESARQKTIAKELEWVRQGAKGRQSKGKARMARFEELNT--NDYQKRNETNELFIPPGPR 318
+ I E W +G R+ + R+ ++L + + KR T EL + GP+
Sbjct: 210 QRHKLNRLIKSESRWAVEGISARRKRNMGRVRALQDLKSERSSQIKRQGTAELALDAGPK 269
Query: 319 LGDKVIEVNNLTKSYGDRVLIDNLSFSVPKGAIVGIIGANGAGKSTLFRMLSGSEQPDSG 378
G KVIE L KSYGD+ ++ + S V +G V +G NGAGK+TL +ML G EQPD G
Sbjct: 270 SGRKVIEAEGLMKSYGDKAIVRDFSIKVQRGDRVAFVGPNGAGKTTLLKMLLGLEQPDEG 329
Query: 379 SIELGETVQLASVEQFRDSMNDKNTIWQE--------ISGGQDIMRINNMEIPSRAYVGR 430
+++G ++LA +Q RD ++ ++W+ ISG D + + Y+
Sbjct: 330 HVQMGTNLELALFDQTRDQLDGNASLWENLTSDPLLGISGKADQVMVRGQPKHVVGYLKE 389
Query: 431 FNFRGGDQQKIIGTLSGGERNRVHLAKLLQAGGNVLLLDEPTNDLDVETLRALEEAILEF 490
F F + + +LSGGE+ R+ LA+L+ N+L+LDEPTNDLDVETL L+E + +
Sbjct: 390 FLFDEAQARAPVRSLSGGEKARLLLARLMARQSNLLVLDEPTNDLDVETLDLLQELLDSY 449
Query: 491 PGCAMVISHDRWFLDRIATHILDYRDEGQVNFYEGNYTEYSAWLKNTYGA 540
G +++SHDR FLDR+AT + G Y G +++Y A GA
Sbjct: 450 DGTVLLVSHDRDFLDRVATTTIAMEGGGGATAYAGGWSDYLAQRAPAEGA 499
Score = 101 bits (251), Expect = 9e-26
Identities = 77/258 (29%), Positives = 124/258 (48%), Gaps = 39/258 (15%)
Query: 19 KQILKDISLSFFPGAKIGVLGLNGSGKSTLLRIMAGIDTEIEGEARPMPGLKIGYLPQ-E 77
K I++D S+ G ++ +G NG+GK+TLL+++ G++ EG + L++ Q
Sbjct: 287 KAIVRDFSIKVQRGDRVAFVGPNGAGKTTLLKMLLGLEQPDEGHVQMGTNLELALFDQTR 346
Query: 78 PKLDPNQTVREAIEEAVSEAKNALKRLDEVYAAYAEPDADFDALAKEQGELEAIIQAQDA 137
+LD N ++ E + D + + D + +++ Q
Sbjct: 347 DQLDGNASLWENLTS------------DPLLGISGKAD-------------QVMVRGQPK 381
Query: 138 H---NLDNILERAANALRLPDWDEKIEVLSGGERRRVAICRLLLEKPEMLLLDEPTNHLD 194
H L L A A R P + LSGGE+ R+ + RL+ + +L+LDEPTN LD
Sbjct: 382 HVVGYLKEFLFDEAQA-RAP-----VRSLSGGEKARLLLARLMARQSNLLVLDEPTNDLD 435
Query: 195 AESVAWLEHFLQEYAGTVVAITHDRYFLDNAAGWILELDRGEG-IPWEGNYSSWLEQKDA 253
E++ L+ L Y GTV+ ++HDR FLD A + ++ G G + G +S +L Q
Sbjct: 436 VETLDLLQELLDSYDGTVLLVSHDRDFLDRVATTTIAMEGGGGATAYAGGWSDYLAQ--- 492
Query: 254 RLKQESAAESARQKTIAK 271
R E AAE A + AK
Sbjct: 493 RAPAEGAAEKAEKAKAAK 510
Score = 95.1 bits (235), Expect = 7e-24
Identities = 68/224 (30%), Positives = 112/224 (50%), Gaps = 11/224 (4%)
Query: 326 VNNLTKSYGDRVLIDNLSFSVPKGAIVGIIGANGAGKSTLFRMLSGSEQPDSGSIELGET 385
++ ++ ++G + +L V G V ++G NG+GKSTL ++++G + D GS+ +
Sbjct: 1 MSGISLTFGGDPVFADLDLVVQPGDRVALVGRNGSGKSTLMKVMAGLVEADKGSLVVPPG 60
Query: 386 VQLASVEQFRDSMNDKNTIWQEISGGQDIMRINNMEIPSRAYVG-RFNFRGGDQQKIIGT 444
+ +EQ M T+ + D + +E RA G +F D + + T
Sbjct: 61 KSVGYMEQ-DPQMTGFATLGDFAASELDPGEMYKVE---RAGEGLKF-----DPARPVAT 111
Query: 445 LSGGERNRVHLAKLLQAGGNVLLLDEPTNDLDVETLRALEEAILEFPGCAMVISHDRWFL 504
SGGE+ R LAKL+ +++LLDEPTN LD+E + LE + ++ISHDR FL
Sbjct: 112 ASGGEKRRAALAKLMAEAPDLMLLDEPTNHLDIEAITWLENELKSTRAAFVLISHDRAFL 171
Query: 505 DRIATHILDYRDEGQVNFYEGNYTEYSAWLKNTYGADVVEPHRL 548
R T + D GQV E + + AW + + + H+L
Sbjct: 172 -RALTRATLWVDRGQVRRQEKGFDAFEAWRDKIWEEEDQQRHKL 214