Pairwise Alignments

Query, 552 a.a., DNA repair protein RecN (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 553 a.a., DNA repair protein RecN from Escherichia coli Nissle 1917

 Score =  604 bits (1558), Expect = e-177
 Identities = 315/551 (57%), Positives = 394/551 (71%)

Query: 1   MLCQLSINNFAIVRFLELDFSPGMTSITGETGAGKSIAIDALGLCLGNRADASSVRPGAS 60
           ML QL+I+NFAIVR LE+DF  GMT ITGETGAGKSIAIDALGLCLG RA+A  VR GA+
Sbjct: 1   MLAQLTISNFAIVRELEIDFHSGMTVITGETGAGKSIAIDALGLCLGGRAEADMVRTGAA 60

Query: 61  KTEVSARFSLHDVPLAKRWLEDNDLELDDECILRRTIGSDGRSRAYINGNPVPLTQLKLL 120
           + ++ ARFSL D P A RWLE+N LE   EC+LRR I SDGRSR +ING  VPL+QL+ L
Sbjct: 61  RADLCARFSLKDTPAALRWLEENQLEDGHECLLRRVISSDGRSRGFINGTAVPLSQLREL 120

Query: 121 GQLLVGIHGQHAHHAMLKSEHQLTLLDSYANHRLLIDTVTASYQRCKQIEAELKQLEASQ 180
           GQLL+ IHGQHAH  + K EHQ  LLD YAN    +  +TA YQ   Q   +L   +   
Sbjct: 121 GQLLIQIHGQHAHQLLTKPEHQKFLLDGYANETSQLQEMTARYQLWHQSCRDLAHHQQLS 180

Query: 181 HERIARKQLVQYQVEELDEFDLKVGEFEEIEQEHKRLANGTELVDSCQASLYLLTDGEES 240
            ER AR +L+QYQ++EL+EF+ + GEFE+I++E+KRLAN  +L+ + Q +L L+ DGE++
Sbjct: 181 QERAARAELLQYQLKELNEFNPQPGEFEQIDEEYKRLANSGQLLTTSQNALALMADGEDA 240

Query: 241 NIESLLNKVVSLAENLQSYDPALTNVSTMLNEALIQVQESAGELQHYLSKLELDPAYFAY 300
           N++S L     L   L   D  L+ V  ML EA IQ+ E++ EL+HY  +L+LDP     
Sbjct: 241 NLQSQLYTAKQLVSELIGMDSKLSGVLDMLEEATIQIAEASDELRHYCDRLDLDPNRLFE 300

Query: 301 LEERLSKAMQLARKHHVSPDKLAEHHLALKAELTTLDDDETKLEEIQLQVEASKSAYLAN 360
           LE+R+SK + LARKHHVSP+ L +++ +L  E   LDD     E + L V       L  
Sbjct: 301 LEQRISKQISLARKHHVSPEALPQYYQSLLEEQQQLDDQADSQETLALAVTKHHQQALET 360

Query: 361 AQKLSQSRARYAKELDKLVTQSIHELNMPKGKFTIEVNFNPEIMSVNGSDNIEFMVTTNP 420
           A+ L Q R  YA EL +L+T S+H L+MP G+FTI+V F+   +  +G+D IEF VTTNP
Sbjct: 361 ARALHQQRQHYANELAQLITDSMHALSMPHGQFTIDVKFDEHHLGADGADRIEFRVTTNP 420

Query: 421 GQPLQPISRVASGGELSRIGLGIQVITAKKVATPTLIFDEVDVGISGPTAAVVGRMLRSL 480
           GQP+QPI++VASGGELSRI L IQVITA+K+ TP LIFDEVDVGISGPTAAVVG++LR L
Sbjct: 421 GQPMQPIAKVASGGELSRIALAIQVITARKMETPALIFDEVDVGISGPTAAVVGKLLRQL 480

Query: 481 GESTQVLCVTHLPQVAGNGHQHMFVNKFNKAGSTETTMTPLDKEQRIQELARLLGGDTIT 540
           GESTQV+CVTHLPQVAG GHQH FV+K      TET M  LDK+ R+QELARLLGG  +T
Sbjct: 481 GESTQVMCVTHLPQVAGCGHQHYFVSKETDGAMTETHMQSLDKKARLQELARLLGGSEVT 540

Query: 541 SNTLANARELL 551
            NTLANA+ELL
Sbjct: 541 RNTLANAKELL 551