Pairwise Alignments

Query, 299 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 311 a.a., Transcriptional regulator from Pseudomonas stutzeri RCH2

 Score =  133 bits (334), Expect = 6e-36
 Identities = 89/298 (29%), Positives = 150/298 (50%), Gaps = 21/298 (7%)

Query: 15  FVHLVNAGSFSQAAKDLDMPIATVSRKLAKLEEKLDKQLFMRSTRKLRLTEEGLALFQRY 74
           FV +V  GSF++AA+ L +   +V++++ +LE +L  +L  R+TRK+ +T +G A ++R 
Sbjct: 10  FVRVVETGSFTKAAETLRISKTSVTQQVQQLEARLRVRLLNRTTRKVNVTADGAAYYERA 69

Query: 75  QSVIAQFDELS---GIGSDKPEGTLRIAAPISIISIIFIHALNEFGRLYPDIRLHISQSN 131
             ++A  D+        +  P G LR+  P  +  +I I AL  F   YPDI+L +  S+
Sbjct: 70  LHLLADLDDTETSLSAAAAVPRGRLRVDVPSPLARMILIPALPAFYAKYPDIQLDMGVSD 129

Query: 132 ELVDLIDKGIDVAIVGGAQPDSSWVSSTLGELDYRLFATPEYLAHAPELTHPDDLEN--H 189
             VDLI + +D  + GG   D S ++  +G+L   ++A P YLA +    HP +LEN  H
Sbjct: 130 RRVDLIGENVDCVVRGGEITDQSLIARHVGDLRLGVYAAPSYLARSGVPAHPSELENSYH 189

Query: 190 QLIKVWPLFNW--------HLKHPNGESFYFNGPTKLTLTDLHGAIQATLDHGGILYGPE 241
           +++     F W        ++     E    +G   L + D +  + A L   G+++ PE
Sbjct: 190 RVVG----FLWARTGKPTPYVMQRQEEQVQVHGRYVLAVDDGNACLAAGLAGLGVIWLPE 245

Query: 242 LFVKQQIKEGRLKVLLPEWIGEQRRISILYHQRSQQPLKVRVF----IEFMQSKAPEL 295
             V+  +  G L  LL +W  ++  + + +        K+RVF    IE M   AP L
Sbjct: 246 YMVRTHLANGELLALLEDWRLDEMPLYLAFPPNRHVSAKLRVFIDWVIELMAQHAPVL 303